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Otub1l1 OTU deubiquitinase, ubiquitin aldehyde binding 1 like 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 314660, updated on 2-May-2024

Summary

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Official Symbol
Otub1l1provided by RGD
Official Full Name
OTU deubiquitinase, ubiquitin aldehyde binding 1 like 1provided by RGD
Primary source
RGD:1565010
See related
Ensembl:ENSRNOG00000009072 AllianceGenome:RGD:1565010
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1565010
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Genomic context

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See Otub1l1 in Genome Data Viewer
Location:
7q11
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 7 NC_086025.1 (14898099..14898997)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 7 NC_051342.1 (14195783..14196918)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 7 NC_005106.4 (18280089..18280982)

Chromosome 7 - NC_086025.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108351412 Neighboring gene vomeronasal 1 receptor pseudogene 101 Neighboring gene vomeronasal 1 receptor pseudogene 102 Neighboring gene actin-like 9 Neighboring gene NFIL3 like basic leucine zipper

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
  
enables peptidase activity IEA
Inferred from Electronic Annotation
more info
  
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
ubiquitin thioesterase OTUB1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086025.1 Reference GRCr8

    Range
    14898099..14898997
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039080063.2 → XP_038935991.1  ubiquitin thioesterase OTUB1-like

    UniProtKB/TrEMBL
    A0A8I6A324, A0A8L2QFR7
    Related
    ENSRNOP00000087369.1
    Conserved Domains (1) summary
    pfam10275
    Location:40 → 269
    Peptidase_C65; Peptidase C65 Otubain
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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