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Gask1a golgi associated kinase 1A [ Rattus norvegicus (Norway rat) ]

Gene ID: 316090, updated on 3-Apr-2024

Summary

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Official Symbol
Gask1aprovided by RGD
Official Full Name
golgi associated kinase 1Aprovided by RGD
Primary source
RGD:1305157
See related
Ensembl:ENSRNOG00000025676 AllianceGenome:RGD:1305157
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Fam198a; RGD1305157
Summary
Predicted to be located in endoplasmic reticulum and extracellular region. Predicted to be active in Golgi apparatus. Orthologous to human GASK1A (golgi associated kinase 1A). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in Adrenal (RPKM 34.1), Thymus (RPKM 18.2) and 9 other tissues See more
Orthologs
human mouse all
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Genomic context

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Location:
8q32
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 8 NC_086026.1 (130488279..130521242)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 8 NC_051343.1 (121610779..121643742)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 8 NC_005107.4 (130581072..130614118)

Chromosome 8 - NC_086026.1Genomic Context describing neighboring genes Neighboring gene cytochrome P450 family 8 subfamily B member 1 Neighboring gene poly(rC) binding protein 2 like 1 Neighboring gene KRAB box domain containing 1 Neighboring gene protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-) Neighboring gene uncharacterized LOC134480254 Neighboring gene uncharacterized LOC134480253

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Fam198a, a member of secreted kinase, secrets through caveolae biogenesis pathway. Wei Z, et al. Acta Biochim Biophys Sin (Shanghai), 2018 Oct 1. PMID 30188967
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RGD

Component Evidence Code Pubs
is_active_in Golgi apparatus IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in Golgi apparatus ISO
Inferred from Sequence Orthology
more info
  
located_in endoplasmic reticulum ISO
Inferred from Sequence Orthology
more info
  
located_in extracellular region ISO
Inferred from Sequence Orthology
more info
  
located_in intracellular membrane-bounded organelle ISO
Inferred from Sequence Orthology
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Golgi-associated kinase 1A
Names
family with sequence similarity 198, member A

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001399327.1 → NP_001386256.1  Golgi-associated kinase 1A

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000008
    UniProtKB/TrEMBL
    F1M9D8
    Related
    ENSRNOP00000014323.6, ENSRNOT00000014323.8
    Conserved Domains (1) summary
    pfam15051
    Location:238 → 562
    FAM198; FAM198 protein

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086026.1 Reference GRCr8

    Range
    130488279..130521242
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063265662.1 → XP_063121732.1  Golgi-associated kinase 1A isoform X1

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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