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Olfml1 olfactomedin-like 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 361621, updated on 5-Mar-2024

Summary

Official Symbol
Olfml1provided by RGD
Official Full Name
olfactomedin-like 1provided by RGD
Primary source
RGD:1311854
See related
Ensembl:ENSRNOG00000056562 AllianceGenome:RGD:1311854
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Predicted to be located in extracellular region. Orthologous to human OLFML1 (olfactomedin like 1). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in Lung (RPKM 153.8), Heart (RPKM 122.0) and 9 other tissues See more
Orthologs
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Genomic context

Location:
1q33
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (170889912..170914300)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (161478129..161502541)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (171793782..171818074)

Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene synaptotagmin 9 Neighboring gene uncharacterized LOC134485161 Neighboring gene PPFIA binding protein 2 Neighboring gene cytochrome b5 reductase 2 Neighboring gene carnitine deficiency-associated gene expressed in ventricle 3 like 1

Genomic regions, transcripts, and products

General gene information

Markers

Gene Ontology Provided by RGD

Process Evidence Code Pubs
involved_in signal transduction IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
olfactomedin-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001013192.2NP_001013210.1  olfactomedin-like protein 1 precursor

    See identical proteins and their annotated locations for NP_001013210.1

    Status: PROVISIONAL

    Source sequence(s)
    BC081972
    UniProtKB/Swiss-Prot
    Q66H86
    UniProtKB/TrEMBL
    A6I7R9
    Related
    ENSRNOP00000073433.1, ENSRNOT00000081351.2
    Conserved Domains (1) summary
    pfam02191
    Location:145393
    OLF; Olfactomedin-like domain

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086019.1 Reference GRCr8

    Range
    170889912..170914300
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039082556.2XP_038938484.1  olfactomedin-like protein 1 isoform X1