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Qrfp pyroglutamylated RFamide peptide [ Rattus norvegicus (Norway rat) ]

Gene ID: 379044, updated on 3-Apr-2024

Summary

Official Symbol
Qrfpprovided by RGD
Official Full Name
pyroglutamylated RFamide peptideprovided by RGD
Primary source
RGD:735020
See related
Ensembl:ENSRNOG00000046473 AllianceGenome:RGD:735020
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
P518; 26RFa; NEWGENE_735020
Summary
Enables G protein-coupled receptor binding activity. Predicted to be involved in several processes, including grooming behavior; neuropeptide signaling pathway; and regulation of feeding behavior. Predicted to be located in extracellular region. Orthologous to human QRFP (pyroglutamylated RFamide peptide). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Low expression observed in reference dataset See more
Orthologs
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Genomic context

Location:
3p12
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 3 NC_086021.1 (35485579..35487902, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 3 NC_051338.1 (15088045..15088419, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 3 NC_005102.4 (9402397..9404354)

Chromosome 3 - NC_086021.1Genomic Context describing neighboring genes Neighboring gene exosome component 2 Neighboring gene ABL proto-oncogene 1, non-receptor tyrosine kinase Neighboring gene uncharacterized LOC134486069 Neighboring gene fibrinogen C domain containing 1 Neighboring gene uncharacterized LOC120101519

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

General gene information

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables G protein-coupled receptor binding IMP
Inferred from Mutant Phenotype
more info
PubMed 
enables neuropeptide hormone activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables neuropeptide hormone activity ISO
Inferred from Sequence Orthology
more info
 
enables neuropeptide hormone activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables orexigenic neuropeptide QRFP receptor binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables orexigenic neuropeptide QRFP receptor binding ISO
Inferred from Sequence Orthology
more info
 
enables orexigenic neuropeptide QRFP receptor binding ISS
Inferred from Sequence or Structural Similarity
more info
 
Process Evidence Code Pubs
involved_in behavior IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in grooming behavior ISO
Inferred from Sequence Orthology
more info
 
involved_in grooming behavior ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in locomotory behavior ISO
Inferred from Sequence Orthology
more info
 
involved_in locomotory behavior ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in neuropeptide signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in neuropeptide signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in neuropeptide signaling pathway ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in positive regulation of blood pressure ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of blood pressure ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in regulation of feeding behavior ISO
Inferred from Sequence Orthology
more info
 
involved_in regulation of feeding behavior ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
orexigenic neuropeptide QRFP
Names
P518 precursor protein
neuropeptide

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_198200.1NP_937843.1  orexigenic neuropeptide QRFP precursor

    See identical proteins and their annotated locations for NP_937843.1

    Status: PROVISIONAL

    Source sequence(s)
    AB109627
    UniProtKB/Swiss-Prot
    P83860
    Related
    ENSRNOP00000066916.1, ENSRNOT00000073731.3
    Conserved Domains (1) summary
    pfam11109
    Location:16124
    RFamide_26RFa; Orexigenic neuropeptide Qrfp/P518

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086021.1 Reference GRCr8

    Range
    35485579..35487902 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063284298.1XP_063140368.1  orexigenic neuropeptide QRFP isoform X1

    UniProtKB/TrEMBL
    A6JU31