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Unc93a unc-93 homolog A [ Mus musculus (house mouse) ]

Gene ID: 381058, updated on 8-Feb-2024

Summary

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Official Symbol
Unc93aprovided by MGI
Official Full Name
unc-93 homolog Aprovided by MGI
Primary source
MGI:MGI:1933250
See related
Ensembl:ENSMUSG00000067049 AllianceGenome:MGI:1933250
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Unc93l; unc-93A
Summary
Predicted to be located in plasma membrane. Orthologous to human UNC93A (unc-93 homolog A). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in small intestine adult (RPKM 10.1), duodenum adult (RPKM 7.8) and 7 other tissues See more
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Genomic context

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Location:
17 A1; 17 8.78 cM
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (13327504..13362553, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (13108617..13143780, complement)

Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene t-complex protein 10b Neighboring gene STARR-seq mESC enhancer starr_41866 Neighboring gene predicted gene 11166 Neighboring gene predicted gene, 23050 Neighboring gene STARR-seq mESC enhancer starr_41868 Neighboring gene predicted gene, 36277 Neighboring gene STARR-seq mESC enhancer starr_41870 Neighboring gene predicted gene, 36798 Neighboring gene predicted gene, 36684 Neighboring gene STARR-seq mESC enhancer starr_41871 Neighboring gene predicted gene 10512

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Synteny of orthologous genes conserved in mammals, snake, fly, nematode, and fission yeast. Trachtulec Z, et al. Mamm Genome, 2001 Mar. PMID 11252172
  2. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
  

General protein information

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Preferred Names
protein unc-93 homolog A
Names
unc93 homolog A

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_199252.2 → NP_954860.1  protein unc-93 homolog A

    See identical proteins and their annotated locations for NP_954860.1

    Status: VALIDATED

    Source sequence(s)
    AC166360, AJ422143
    Consensus CDS
    CCDS28402.1
    UniProtKB/Swiss-Prot
    Q710D3
    UniProtKB/TrEMBL
    B9EIH9
    Related
    ENSMUSP00000082032.6, ENSMUST00000084966.6
    Conserved Domains (1) summary
    cd17406
    Location:8 → 433
    MFS_unc93A_like; Protein unc-93 homolog A and similar proteins of the Major Facilitator Superfamily of transporters

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000083.7 Reference GRCm39 C57BL/6J

    Range
    13327504..13362553 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011246216.3 → XP_011244518.1  protein unc-93 homolog A isoform X1

    See identical proteins and their annotated locations for XP_011244518.1

    UniProtKB/Swiss-Prot
    Q710D3
    UniProtKB/TrEMBL
    B9EIH9
    Conserved Domains (1) summary
    cd17406
    Location:8 → 433
    MFS_unc93A_like; Protein unc-93 homolog A and similar proteins of the Major Facilitator Superfamily of transporters

  2. XM_011246217.3 → XP_011244519.1  protein unc-93 homolog A isoform X1

    See identical proteins and their annotated locations for XP_011244519.1

    UniProtKB/Swiss-Prot
    Q710D3
    UniProtKB/TrEMBL
    B9EIH9
    Conserved Domains (1) summary
    cd17406
    Location:8 → 433
    MFS_unc93A_like; Protein unc-93 homolog A and similar proteins of the Major Facilitator Superfamily of transporters

  3. XM_006523333.5 → XP_006523396.1  protein unc-93 homolog A isoform X2

    UniProtKB/TrEMBL
    B9EIH9
    Conserved Domains (1) summary
    cd17406
    Location:23 → 425
    MFS_unc93A_like; Protein unc-93 homolog A and similar proteins of the Major Facilitator Superfamily of transporters

  4. XM_011246215.4 → XP_011244517.1  protein unc-93 homolog A isoform X1

    See identical proteins and their annotated locations for XP_011244517.1

    UniProtKB/Swiss-Prot
    Q710D3
    UniProtKB/TrEMBL
    B9EIH9
    Conserved Domains (1) summary
    cd17406
    Location:8 → 433
    MFS_unc93A_like; Protein unc-93 homolog A and similar proteins of the Major Facilitator Superfamily of transporters

  5. XM_011246218.3 → XP_011244520.1  protein unc-93 homolog A isoform X1

    See identical proteins and their annotated locations for XP_011244520.1

    UniProtKB/Swiss-Prot
    Q710D3
    UniProtKB/TrEMBL
    B9EIH9
    Conserved Domains (1) summary
    cd17406
    Location:8 → 433
    MFS_unc93A_like; Protein unc-93 homolog A and similar proteins of the Major Facilitator Superfamily of transporters
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q710D3.1 GenPept UniProtKB/Swiss-Prot:Q710D3

Gene LinkOut

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