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Gm21943 predicted gene, 21943 [ Mus musculus (house mouse) ]

Gene ID: 434935, updated on 8-Feb-2024

Summary

Official Symbol
Gm21943provided by MGI
Official Full Name
predicted gene, 21943provided by MGI
Primary source
MGI:MGI:5439394
See related
Ensembl:ENSMUSG00000096122 AllianceGenome:MGI:5439394
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
Predicted to enable methylated histone binding activity. Predicted to be involved in regulation of transcription, DNA-templated. Predicted to be active in cytosol and nucleoplasm. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

Location:
Y; Y C2
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) Y NC_000087.8 (57539945..57542254, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) Y NC_000087.7 (57531417..57533726, complement)

Chromosome Y - NC_000087.8Genomic Context describing neighboring genes Neighboring gene predicted gene, 20913 Neighboring gene Sycp3 like Y-linked Neighboring gene predicted gene, 21724 Neighboring gene predicted gene 28326

Genomic regions, transcripts, and products

General gene information

Markers

Clone Names

  • MGC107098, MGC118215, MGC151463

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables methylated histone binding IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in nucleoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
uncharacterized protein LOC434935
Names
Ssty2 family member

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001017393.3NP_001017393.1  uncharacterized protein LOC434935

    See identical proteins and their annotated locations for NP_001017393.1

    Status: PREDICTED

    Source sequence(s)
    BC089465
    Consensus CDS
    CCDS85887.1
    UniProtKB/TrEMBL
    Q5FWD5, Q62456
    Related
    ENSMUSP00000136356.2, ENSMUST00000178181.3
    Conserved Domains (1) summary
    pfam02513
    Location:2170
    Spin-Ssty; Spin/Ssty Family

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000087.8 Reference GRCm39 C57BL/6J

    Range
    57539945..57542254 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)