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ELF3 E74 like ETS transcription factor 3 [ Canis lupus familiaris (dog) ]

Gene ID: 490235, updated on 5-Mar-2024

Summary

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Official Symbol
ELF3provided by VGNC
Official Full Name
E74 like ETS transcription factor 3provided by VGNC
Primary source
VGNC:VGNC:40300
See related
Ensembl:ENSCAFG00845015842
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
10
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 7 NC_051811.1 (967232..973143, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 7 NC_006589.4 (1011070..1016981, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 7 NC_049228.1 (1087488..1093399, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 7 NC_049267.1 (955282..961193, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 7 NC_049748.1 (1063480..1069391, complement)

Chromosome 7 - NC_051811.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L23-like Neighboring gene uncharacterized LOC111096851 Neighboring gene arginyl aminopeptidase Neighboring gene translocase of inner mitochondrial membrane 17A Neighboring gene 60S ribosomal protein L17-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ETS-related transcription factor Elf-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051811.1 Reference ROS_Cfam_1.0

    Range
    967232..973143 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038670729.1 → XP_038526657.1  ETS-related transcription factor Elf-3

    UniProtKB/TrEMBL
    A0A8C0KWR3, A0A8C0LWK7, A0A8I3NN04
    Conserved Domains (2) summary
    smart00413
    Location:270 → 357
    ETS; erythroblast transformation specific domain
    cl15755
    Location:53 → 132
    SAM_superfamily; SAM (Sterile alpha motif )

  2. XM_038670728.1 → XP_038526656.1  ETS-related transcription factor Elf-3

    UniProtKB/TrEMBL
    A0A8C0KWR3, A0A8C0LWK7, A0A8I3NN04
    Related
    ENSCAFP00845022344.1, ENSCAFT00845028404.1
    Conserved Domains (2) summary
    smart00413
    Location:270 → 357
    ETS; erythroblast transformation specific domain
    cl15755
    Location:53 → 132
    SAM_superfamily; SAM (Sterile alpha motif )

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049267.1 Alternate UMICH_Zoey_3.1

    Range
    955282..961193 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038480566.1 → XP_038336494.1  ETS-related transcription factor Elf-3

    Conserved Domains (2) summary
    smart00413
    Location:270 → 357
    ETS; erythroblast transformation specific domain
    cl15755
    Location:53 → 132
    SAM_superfamily; SAM (Sterile alpha motif )

  2. XM_038480565.1 → XP_038336493.1  ETS-related transcription factor Elf-3

    Conserved Domains (2) summary
    smart00413
    Location:270 → 357
    ETS; erythroblast transformation specific domain
    cl15755
    Location:53 → 132
    SAM_superfamily; SAM (Sterile alpha motif )

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049748.1 Alternate UNSW_CanFamBas_1.0

    Range
    1063480..1069391 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038606024.1 → XP_038461952.1  ETS-related transcription factor Elf-3

    Conserved Domains (2) summary
    smart00413
    Location:270 → 357
    ETS; erythroblast transformation specific domain
    cl15755
    Location:53 → 132
    SAM_superfamily; SAM (Sterile alpha motif )

  2. XM_038606023.1 → XP_038461951.1  ETS-related transcription factor Elf-3

    Conserved Domains (2) summary
    smart00413
    Location:270 → 357
    ETS; erythroblast transformation specific domain
    cl15755
    Location:53 → 132
    SAM_superfamily; SAM (Sterile alpha motif )

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049228.1 Alternate UU_Cfam_GSD_1.0

    Range
    1087488..1093399 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038541892.1 → XP_038397820.1  ETS-related transcription factor Elf-3

    UniProtKB/TrEMBL
    A0A8C0KWR3, A0A8C0LWK7, A0A8I3NN04
    Conserved Domains (2) summary
    smart00413
    Location:270 → 357
    ETS; erythroblast transformation specific domain
    cl15755
    Location:53 → 132
    SAM_superfamily; SAM (Sterile alpha motif )

  2. XM_038541891.1 → XP_038397819.1  ETS-related transcription factor Elf-3

    UniProtKB/TrEMBL
    A0A8C0KWR3, A0A8C0LWK7, A0A8I3NN04
    Conserved Domains (2) summary
    smart00413
    Location:270 → 357
    ETS; erythroblast transformation specific domain
    cl15755
    Location:53 → 132
    SAM_superfamily; SAM (Sterile alpha motif )

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006589.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    1011070..1016981 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005622192.4 → XP_005622249.1  ETS-related transcription factor Elf-3

    See identical proteins and their annotated locations for XP_005622249.1

    UniProtKB/TrEMBL
    A0A8C0KWR3, A0A8P0NCJ4
    Conserved Domains (2) summary
    smart00413
    Location:270 → 357
    ETS; erythroblast transformation specific domain
    cl15755
    Location:53 → 132
    SAM_superfamily; SAM (Sterile alpha motif )

  2. XM_005622191.4 → XP_005622248.1  ETS-related transcription factor Elf-3

    See identical proteins and their annotated locations for XP_005622248.1

    UniProtKB/TrEMBL
    A0A8C0KWR3, A0A8P0NCJ4
    Conserved Domains (2) summary
    smart00413
    Location:270 → 357
    ETS; erythroblast transformation specific domain
    cl15755
    Location:53 → 132
    SAM_superfamily; SAM (Sterile alpha motif )
Nucleotide Protein
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