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Vom1r20 vomeronasal 1 receptor 20 [ Rattus norvegicus (Norway rat) ]

Gene ID: 494225, updated on 29-Feb-2024

Summary

Official Symbol
Vom1r20provided by RGD
Official Full Name
vomeronasal 1 receptor 20provided by RGD
Primary source
RGD:1359652
See related
AllianceGenome:RGD:1359652
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
V1rf1
Summary
Predicted to enable pheromone receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway and response to pheromone. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Orthologous to human VN1R4 (vomeronasal 1 receptor 4). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

See Vom1r20 in Genome Data Viewer
Location:
1q12
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (69581345..69582316)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (60908396..60913865)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (61132818..61133726)

Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene vomeronasal 1 receptor pseudogene 23 Neighboring gene vomeronasal 1 receptor pseudogene 24 Neighboring gene endogenous retrovirus group K member 21 Env polyprotein-like 2 Neighboring gene uncharacterized LOC134482873 Neighboring gene vomeronasal 1 receptor 21

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables pheromone receptor activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in response to pheromone IEA
Inferred from Electronic Annotation
more info
 
involved_in sensory perception of chemical stimulus IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
LOW QUALITY PROTEIN: vomeronasal type-1 receptor 4; vomeronasal 1 receptor 20
Names
vomernasal 1 receptor Vom1r20
vomeronasal 1 receptor, F1
vomeronasal V1r-type receptor V1rf1
vomeronasal type-1 receptor 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086019.1 Reference GRCr8

    Range
    69581345..69582316
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063280554.1XP_063136624.1  LOW QUALITY PROTEIN: vomeronasal type-1 receptor 4

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001009506.1: Suppressed sequence

    Description
    NM_001009506.1: This RefSeq record was removed by NCBI staff. Contact info@ncbi.nlm.nih.gov for further information.