U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Vom1r21 vomeronasal 1 receptor 21 [ Rattus norvegicus (Norway rat) ]

Gene ID: 494229, updated on 13-Apr-2024

Summary

Symbol
Vom1r21provided by RGD
Full Name
vomeronasal 1 receptor 21provided by RGD
Primary source
RGD:1359719
See related
Ensembl:ENSRNOG00000064479 AllianceGenome:RGD:1359719
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
V1rf3
Summary
Predicted to enable pheromone receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway and response to pheromone. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Orthologous to human VN1R4 (vomeronasal 1 receptor 4). [provided by Alliance of Genome Resources, Apr 2022]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Location:
1q12
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (69636830..69637753)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (60963939..60964862)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 19 NC_005118.4 (28377249..28378118)

Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene vomeronasal 1 receptor 20 Neighboring gene endogenous retrovirus group K member 21 Env polyprotein-like 2 Neighboring gene uncharacterized LOC134482873 Neighboring gene vomeronasal 1 receptor pseudogene 25 Neighboring gene outer mitochondrial membrane lipid metabolism regulator OPA3, pseudogene 1

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables pheromone receptor activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in response to pheromone IEA
Inferred from Electronic Annotation
more info
 
involved_in sensory perception of chemical stimulus IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
vomeronasal type-1 receptor 4
Names
vomernasal 1 receptor Vom1r21
vomeronasal 1 receptor, F3
vomeronasal V1r-type receptor V1rf3

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001009510.2NP_001009510.1  vomeronasal type-1 receptor 4

    See identical proteins and their annotated locations for NP_001009510.1

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000001
    UniProtKB/TrEMBL
    A6KB88, Q5J3H1
    Related
    ENSRNOP00000083428.1, ENSRNOT00000114331.1

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086019.1 Reference GRCr8

    Range
    69636830..69637753
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)