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Vom1r50 vomeronasal 1 receptor 50 [ Rattus norvegicus (Norway rat) ]

Gene ID: 494267, updated on 13-Apr-2024

Summary

Official Symbol
Vom1r50provided by RGD
Official Full Name
vomeronasal 1 receptor 50provided by RGD
Primary source
RGD:1359168
See related
Ensembl:ENSRNOG00000032817 AllianceGenome:RGD:1359168
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
V1rg11
Summary
Predicted to enable pheromone receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway and response to pheromone. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

See Vom1r50 in Genome Data Viewer
Location:
1q21
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (81583682..81587933, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (72511511..72515762, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 9 NC_005108.4 (52400683..52401660, complement)

Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene vomeronasal 1 receptor 47 Neighboring gene vomeronasal 1 receptor 49 Neighboring gene ribosomal protein L36A like 2 Neighboring gene vomeronasal 1 receptor pseudogene 54 Neighboring gene zinc finger protein 551

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables pheromone receptor activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in response to pheromone IEA
Inferred from Electronic Annotation
more info
 
involved_in sensory perception of chemical stimulus IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
vomeronasal 1 receptor 50
Names
vomernasal 1 receptor Vom1r50
vomeronasal 1 receptor, G11
vomeronasal V1r-type receptor V1rg11
vomeronasal type-1 receptor 4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001008918.2NP_001008918.1  vomeronasal 1 receptor 50

    See identical proteins and their annotated locations for NP_001008918.1

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000001
    UniProtKB/TrEMBL
    A6KQP0
    Related
    ENSRNOP00000084585.1, ENSRNOT00000109489.1

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086019.1 Reference GRCr8

    Range
    81583682..81587933 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)