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Vom1r56 vomeronasal 1 receptor 56 [ Rattus norvegicus (Norway rat) ]

Gene ID: 494277, updated on 3-Apr-2024

Summary

Symbol
Vom1r56provided by RGD
Full Name
vomeronasal 1 receptor 56provided by RGD
Primary source
RGD:1359419
See related
Ensembl:ENSRNOG00000070690 AllianceGenome:RGD:1359419
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
V1rj2; V1rj5
Summary
Predicted to enable pheromone receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway and response to pheromone. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

Location:
1q21
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (82943580..82947319)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (73867103..73868131)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 2 NC_005101.4 (168228099..168229055)

Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene vomeronasal type-1 receptor 2-like Neighboring gene vomeronasal type-1 receptor 2-like Neighboring gene vomeronasal 1 receptor 57 Neighboring gene vomeronasal 1 receptor pseudogene 65

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables pheromone receptor activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in response to pheromone IEA
Inferred from Electronic Annotation
more info
 
involved_in sensory perception of chemical stimulus IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
vomeronasal 1 receptor 56; vomeronasal type-1 receptor 2
Names
vomernasal 1 receptor Vom1r56
vomeronasal 1 receptor, J2
vomeronasal 1 receptor, j5
vomeronasal V1r-type receptor V1rj5
vomeronasal type-1 receptor 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086019.1 Reference GRCr8

    Range
    82943580..82947319
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063280910.1XP_063136980.1  vomeronasal type-1 receptor 2

    UniProtKB/TrEMBL
    A0A8I6AJK0

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001008929.1: Suppressed sequence

    Description
    NM_001008929.1: This RefSeq record was removed by NCBI staff. Contact info@ncbi.nlm.nih.gov for further information.