C10h17orf58 similar to human chromosome 17 open reading frame 58 [Rattus norvegicus (Norway rat)] - Gene

Summary

Official Symbol: C10h17orf58provided by RGD
Official Full Name: similar to human chromosome 17 open reading frame 58provided by RGD
Primary source: RGD:1565033
See related: Ensembl:ENSRNOG00000043295 AllianceGenome:RGD:1565033
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as: RGD1565033
Summary: Orthologous to human C17orf58 (chromosome 17 open reading frame 58). [provided by Alliance of Genome Resources, Apr 2022]
Expression: Biased expression in Lung (RPKM 106.3), Heart (RPKM 75.8) and 9 other tissues See more
Orthologs: human mouse all
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Genomic context

Location:: 10q32.1

Exon count:: 5

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	10	NC_086028.1 (92472779..92477330)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	10	NC_051345.1 (91972938..91977606)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	10	NC_005109.4 (95240314..95245146)

Chromosome 10 - NC_086028.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
BioProject: PRJNA238328
Publication: PMID 24510058
Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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General protein information

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Preferred Names: UPF0450 protein C17orf58 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001109050.2 → NP_001102520.2 UPF0450 protein C17orf58 homolog isoform 1 precursor

Status: VALIDATED

Source sequence(s)

JAXUCZ010000010
NM_001402041.1 → NP_001388970.1 UPF0450 protein C17orf58 homolog isoform 2 precursor

Status: VALIDATED

Source sequence(s)

JAXUCZ010000010

UniProtKB/TrEMBL

D3ZWY4

Related

ENSRNOP00000063842.2, ENSRNOT00000065589.2