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Tmem81 transmembrane protein 81 [ Rattus norvegicus (Norway rat) ]

Gene ID: 498229, updated on 5-Mar-2024

Summary

Official Symbol
Tmem81provided by RGD
Official Full Name
transmembrane protein 81provided by RGD
Primary source
RGD:1561544
See related
Ensembl:ENSRNOG00000028752 AllianceGenome:RGD:1561544
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Predicted to be integral component of membrane. Orthologous to human TMEM81 (transmembrane protein 81). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in Testes (RPKM 62.4), Thymus (RPKM 24.4) and 9 other tissues See more
Orthologs
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Genomic context

See Tmem81 in Genome Data Viewer
Location:
13q13
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 13 NC_086031.1 (46491808..46494239)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 13 NC_051348.1 (43939677..43942108)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 13 NC_005112.4 (49277722..49280153)

Chromosome 13 - NC_086031.1Genomic Context describing neighboring genes Neighboring gene transmembrane and coiled-coil domain family 2 Neighboring gene dual serine/threonine and tyrosine protein kinase Neighboring gene RB binding protein 5, histone lysine methyltransferase complex subunit Neighboring gene U6 spliceosomal RNA Neighboring gene contactin 2 Neighboring gene neurofascin

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001017490.1NP_001017490.1  transmembrane protein 81 precursor

    See identical proteins and their annotated locations for NP_001017490.1

    Status: PROVISIONAL

    Source sequence(s)
    BC079284
    UniProtKB/Swiss-Prot
    Q6AXW8
    UniProtKB/TrEMBL
    A6IC53
    Related
    ENSRNOP00000034105.3, ENSRNOT00000035335.4
    Conserved Domains (1) summary
    cd00096
    Location:100163
    Ig; Immunoglobulin domain

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086031.1 Reference GRCr8

    Range
    46491808..46494239
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)