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Kiaa1328 KIAA1328 homolog [ Rattus norvegicus (Norway rat) ]

Gene ID: 498831, updated on 5-Mar-2024

Summary

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Official Symbol
Kiaa1328provided by RGD
Official Full Name
KIAA1328 homologprovided by RGD
Primary source
RGD:1562608
See related
Ensembl:ENSRNOG00000029466 AllianceGenome:RGD:1562608
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1562608; RGD1564140
Summary
Orthologous to human KIAA1328 (KIAA1328). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in Adrenal (RPKM 57.4), Lung (RPKM 54.7) and 9 other tissues See more
Orthologs
human mouse all
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Genomic context

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See Kiaa1328 in Genome Data Viewer
Location:
18p12
Exon count:
21
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 18 NC_086036.1 (16762421..17061439)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 18 NC_051353.1 (16488569..16776373)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 18 NC_005117.4 (17394586..17678605)

Chromosome 18 - NC_086036.1Genomic Context describing neighboring genes Neighboring gene formin homology 2 domain containing 3 Neighboring gene uncharacterized LOC134482922 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase-like Neighboring gene tubulin polyglutamylase complex subunit 2 Neighboring gene CUGBP, Elav-like family member 4 Neighboring gene uncharacterized LOC120098197 Neighboring gene uncharacterized LOC103694180

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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Related articles in PubMed

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Clone Names

  • MGC188779

General protein information

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Preferred Names
protein hinderin

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001134607.1 → NP_001128079.1  protein hinderin

    See identical proteins and their annotated locations for NP_001128079.1

    Status: PROVISIONAL

    Source sequence(s)
    CH473974
    UniProtKB/TrEMBL
    A0A8I5ZMY6, A6J2L5
    Related
    ENSRNOP00000079204.1, ENSRNOT00000116047.1
    Conserved Domains (1) summary
    pfam15369
    Location:28 → 351
    KIAA1328; uncharacterized protein KIAA1328

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086036.1 Reference GRCr8

    Range
    16762421..17061439
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017601012.3 → XP_017456501.1  protein hinderin isoform X5

    UniProtKB/TrEMBL
    F1LT68

  2. XM_003751756.6 → XP_003751804.2  protein hinderin isoform X1

    UniProtKB/TrEMBL
    A0A8I6G470, F1LT68
    Related
    ENSRNOP00000080158.1
    Conserved Domains (1) summary
    pfam15369
    Location:173 → 496
    KIAA1328; uncharacterized protein KIAA1328

  3. XM_017601011.3 → XP_017456500.1  protein hinderin isoform X2

    UniProtKB/TrEMBL
    F1LT68
    Related
    ENSRNOP00000048010.5

  4. XM_063277515.1 → XP_063133585.1  protein hinderin isoform X3

  5. XM_039097027.2 → XP_038952955.1  protein hinderin isoform X4

    UniProtKB/TrEMBL
    F1LT68
    Conserved Domains (1) summary
    pfam15369
    Location:173 → 496
    KIAA1328; Uncharacterized protein KIAA1328

  6. XM_039097028.2 → XP_038952956.1  protein hinderin isoform X6

    Conserved Domains (1) summary
    pfam15369
    Location:173 → 496
    KIAA1328; Uncharacterized protein KIAA1328

  7. XM_063277516.1 → XP_063133586.1  protein hinderin isoform X9

  8. XM_039097035.2 → XP_038952963.1  protein hinderin isoform X8

    Conserved Domains (1) summary
    pfam15369
    Location:1 → 239
    KIAA1328; Uncharacterized protein KIAA1328

  9. XM_039097032.2 → XP_038952960.1  protein hinderin isoform X7

    UniProtKB/TrEMBL
    A0A8I5ZMY6
    Conserved Domains (1) summary
    pfam15369
    Location:28 → 351
    KIAA1328; Uncharacterized protein KIAA1328

  10. XM_039097031.2 → XP_038952959.1  protein hinderin isoform X7

    UniProtKB/TrEMBL
    A0A8I5ZMY6
    Conserved Domains (1) summary
    pfam15369
    Location:28 → 351
    KIAA1328; Uncharacterized protein KIAA1328

  11. XM_039097029.2 → XP_038952957.1  protein hinderin isoform X7

    UniProtKB/TrEMBL
    A0A8I5ZMY6
    Conserved Domains (1) summary
    pfam15369
    Location:28 → 351
    KIAA1328; Uncharacterized protein KIAA1328

  12. XM_039097030.2 → XP_038952958.1  protein hinderin isoform X7

    UniProtKB/TrEMBL
    A0A8I5ZMY6
    Conserved Domains (1) summary
    pfam15369
    Location:28 → 351
    KIAA1328; Uncharacterized protein KIAA1328

  13. XM_039097033.2 → XP_038952961.1  protein hinderin isoform X8

    Conserved Domains (1) summary
    pfam15369
    Location:1 → 239
    KIAA1328; Uncharacterized protein KIAA1328

  14. XM_039097034.2 → XP_038952962.1  protein hinderin isoform X8

    Conserved Domains (1) summary
    pfam15369
    Location:1 → 239
    KIAA1328; Uncharacterized protein KIAA1328

  15. XM_039097036.2 → XP_038952964.1  protein hinderin isoform X8

    Conserved Domains (1) summary
    pfam15369
    Location:1 → 239
    KIAA1328; Uncharacterized protein KIAA1328
Nucleotide Protein Strain
Heading Accession and Version

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