Ankrd34b ankyrin repeat domain 34B [Rattus norvegicus (Norway rat)] - Gene

Summary

Symbol: Ankrd34bprovided by RGD
Full Name: ankyrin repeat domain 34Bprovided by RGD
Primary source: RGD:1594383
See related: Ensembl:ENSRNOG00000040166 AllianceGenome:RGD:1594383
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as: Dp58
Summary: Orthologous to human ANKRD34B (ankyrin repeat domain 34B). [provided by Alliance of Genome Resources, Apr 2022]
Expression: Biased expression in Brain (RPKM 57.8), Testes (RPKM 5.0) and 1 other tissue See more
Orthologs: human mouse all
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Genomic context

Location:: 2q12

Exon count:: 5

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	2	NC_086020.1 (25386452..25402376)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	2	NC_051337.1 (23651083..23668041)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	2	NC_005101.4 (22000106..22016764)

Chromosome 2 - NC_086020.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
BioProject: PRJNA238328
Publication: PMID 24510058
Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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General protein information

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Preferred Names: ankyrin repeat domain-containing protein 34B

Names: cytosolic phosphoprotein DP58

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001109174.1 → NP_001102644.1 ankyrin repeat domain-containing protein 34B

See identical proteins and their annotated locations for NP_001102644.1

Status: PROVISIONAL

Source sequence(s)

CH473955

UniProtKB/TrEMBL

A6I4Q8, D3ZKP1

Related

ENSRNOP00000058526.2, ENSRNOT00000061812.4

Conserved Domains (3) summary

cd00204
Location:31 → 138

ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...

pfam13857
Location:70 → 125

Ank_5; Ankyrin repeats (many copies)

sd00045
Location:42 → 81

ANK; ANK repeat [structural motif]