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Nrbf2l1 nuclear receptor binding factor 2 like 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 499670, updated on 6-Jun-2024

Summary

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Official Symbol
Nrbf2l1provided by RGD
Official Full Name
nuclear receptor binding factor 2 like 1provided by RGD
Primary source
RGD:1560263
See related
Ensembl:ENSRNOG00000030494 AllianceGenome:RGD:1560263
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1560263
Expression
Biased expression in Liver (RPKM 139.7), Adrenal (RPKM 90.9) and 9 other tissues See more
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Genomic context

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See Nrbf2l1 in Genome Data Viewer
Location:
2q34
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 2 NC_086020.1 (184940723..184949297, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 2 NC_051337.1 (182253957..182256611, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 2 NC_005101.4 (195855521..195857093, complement)

Chromosome 2 - NC_086020.1Genomic Context describing neighboring genes Neighboring gene regulatory subunit of type II PKA R-subunit domain containing 1 Neighboring gene CUGBP, Elav-like family member 3 Neighboring gene sorting nexin 27 Neighboring gene uncharacterized LOC134485647 Neighboring gene tuftelin 1 Neighboring gene uncharacterized LOC120100872 Neighboring gene uncharacterized LOC134485648 Neighboring gene cingulin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RGD

Process Evidence Code Pubs
involved_in autophagy IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
nuclear receptor-binding factor 2-like; similar to nuclear receptor binding factor 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086020.1 Reference GRCr8

    Range
    184940723..184949297 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063282734.1 → XP_063138804.1  nuclear receptor-binding factor 2-like isoform X1

    UniProtKB/Swiss-Prot
    Q9QYK3
    UniProtKB/TrEMBL
    A0A8I6GHP4

  2. XM_063282735.1 → XP_063138805.1  nuclear receptor-binding factor 2-like isoform X2

    UniProtKB/Swiss-Prot
    Q9QYK3
Nucleotide Protein Strain
Heading Accession and Version

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