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Or4f5 olfactory receptor family 4 subfamily F member 5 [ Rattus norvegicus (Norway rat) ]

Gene ID: 499858, updated on 29-Feb-2024

Summary

Official Symbol
Or4f5provided by RGD
Official Full Name
olfactory receptor family 4 subfamily F member 5provided by RGD
Primary source
RGD:1566059
See related
AllianceGenome:RGD:1566059
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1566059
Summary
Orthologous to human OR4F5 (olfactory receptor family 4 subfamily F member 5). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Low expression observed in reference dataset See more
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Genomic context

See Or4f5 in Genome Data Viewer
Location:
3q34
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 3 NC_086021.1 (118530958..118535514)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 3 NC_051338.1 (98076440..98080996)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 3 NC_005102.4 (102679768..102684324)

Chromosome 3 - NC_086021.1Genomic Context describing neighboring genes Neighboring gene olfactory receptor family 4 subfamily F member 4B Neighboring gene olfactory receptor family 4 subfamily K member 42B Neighboring gene olfactory receptor family 4 subfamily K member 42C, pseudogene 1 Neighboring gene olfactory receptor family 4 subfamily F member 4A

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

General protein information

Preferred Names
olfactory receptor 4F4-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086021.1 Reference GRCr8

    Range
    118530958..118535514
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006234699.1XP_006234761.1  olfactory receptor 4F4-like

    See identical proteins and their annotated locations for XP_006234761.1

    UniProtKB/TrEMBL
    A0A8I6A6A0
    Conserved Domains (2) summary
    pfam00001
    Location:67313
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    cl21561
    Location:61327
    7tm_4; Olfactory receptor