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Ankrd66 ankyrin repeat domain 66 [ Rattus norvegicus (Norway rat) ]

Gene ID: 501105, updated on 3-Apr-2024

Summary

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Symbol
Ankrd66provided by RGD
Full Name
ankyrin repeat domain 66provided by RGD
Primary source
RGD:1560151
See related
Ensembl:ENSRNOG00000068669 AllianceGenome:RGD:1560151
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1560151
Summary
Orthologous to human ANKRD66 (ankyrin repeat domain 66). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in Lung (RPKM 24.3), Brain (RPKM 5.5) and 3 other tissues See more
Orthologs
human mouse all
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Genomic context

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See Ankrd66 in Genome Data Viewer
Location:
9q13
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 9 NC_086027.1 (24918206..24938481)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 9 NC_051344.1 (17421432..17441212)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 9 NC_005108.4 (19977229..20014747)

Chromosome 9 - NC_086027.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134480345 Neighboring gene tudor domain containing 6 Neighboring gene phospholipase A2 group VII Neighboring gene uncharacterized LOC120094640 Neighboring gene meprin A subunit alpha Neighboring gene adhesion G protein-coupled receptor F5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
ankyrin repeat domain-containing protein 66

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086027.1 Reference GRCr8

    Range
    24918206..24938481
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006244618.5 → XP_006244680.1  ankyrin repeat domain-containing protein 66 isoform X1

    See identical proteins and their annotated locations for XP_006244680.1

    UniProtKB/TrEMBL
    A0A8I6B646
    Conserved Domains (3) summary
    cd00204
    Location:71 → 188
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:71 → 166
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:69 → 98
    ANK; ANK repeat [structural motif]

  2. XM_063267886.1 → XP_063123956.1  ankyrin repeat domain-containing protein 66 isoform X2

    UniProtKB/TrEMBL
    A0A8I6A1M3

  3. XM_008766912.4 → XP_008765134.1  ankyrin repeat domain-containing protein 66 isoform X2

    See identical proteins and their annotated locations for XP_008765134.1

    UniProtKB/TrEMBL
    A0A8I6A1M3
    Related
    ENSRNOP00000084282.1
    Conserved Domains (3) summary
    cd00204
    Location:70 → 187
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:70 → 165
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:68 → 97
    ANK; ANK repeat [structural motif]

  4. XM_017596742.3 → XP_017452231.1  ankyrin repeat domain-containing protein 66 isoform X1

    UniProtKB/TrEMBL
    A0A8I6B646
    Related
    ENSRNOP00000097704.1
    Conserved Domains (3) summary
    cd00204
    Location:71 → 188
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:71 → 166
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:69 → 98
    ANK; ANK repeat [structural motif]

  5. XM_017596744.3 → XP_017452233.1  ankyrin repeat domain-containing protein 66 isoform X1

    UniProtKB/TrEMBL
    A0A8I6B646
    Conserved Domains (3) summary
    cd00204
    Location:71 → 188
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:71 → 166
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:69 → 98
    ANK; ANK repeat [structural motif]

RNA

  1. XR_005489053.2 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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