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Cd300c CD300c molecule [ Rattus norvegicus (Norway rat) ]

Gene ID: 501745, updated on 29-Feb-2024

Summary

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Symbol
Cd300cprovided by RGD
Full Name
CD300c moleculeprovided by RGD
Primary source
RGD:1565161
See related
Ensembl:ENSRNOG00000045888 AllianceGenome:RGD:1565161
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1565046; RGD1565161
Expression
Biased expression in Spleen (RPKM 18.1), Lung (RPKM 11.2) and 7 other tissues See more
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Genomic context

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See Cd300c in Genome Data Viewer
Location:
10q32.1
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 10 NC_086028.1 (100727249..100732202)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 10 NC_051345.1 (100228254..100233207)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 10 NC_005109.4 (103562526..103565699)

Chromosome 10 - NC_086028.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 25 member 5, pseudogene 5 Neighboring gene Cd300 molecule-like family member D, pseudogene 1 Neighboring gene CD300c molecule, pseudogene 2 Neighboring gene CD300C molecule 2 Neighboring gene solute carrier family 25 member 5, pseudogene 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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Related articles in PubMed

  1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
CD300c molecule; CMRF-35-like molecule 4
Names
CMRF35-like molecule 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086028.1 Reference GRCr8

    Range
    100727249..100732202
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002727843.6 → XP_002727889.3  CMRF-35-like molecule 4

    UniProtKB/TrEMBL
    M0R768
    Related
    ENSRNOP00000065288.3
    Conserved Domains (1) summary
    cd05716
    Location:25 → 115
    IgV_pIgR_like; Immunoglobulin (Ig)-like domain in the polymeric Ig receptor (pIgR) and similar proteins
Nucleotide Protein Strain
Heading Accession and Version

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