U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Pramel38 PRAME like 38 [ Rattus norvegicus (Norway rat) ]

Gene ID: 501903, updated on 3-Apr-2024

Summary

Go to the top of the page Help
Official Symbol
Pramel38provided by RGD
Official Full Name
PRAME like 38provided by RGD
Primary source
RGD:1561977
See related
Ensembl:ENSRNOG00000063585 AllianceGenome:RGD:1561977
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1561977
Expression
Low expression observed in reference dataset See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Pramel38 in Genome Data Viewer
Location:
14p22
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 14 NC_086032.1 (14469873..14472505)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 14 NC_051349.1 (14165928..14168560)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 14 NC_005113.4 (688145..690817)

Chromosome 14 - NC_086032.1Genomic Context describing neighboring genes Neighboring gene PRAME family member 20 like 1 Neighboring gene PRAME family member 8, pseudogene 2 Neighboring gene protein NYNRIN-like Neighboring gene PRAME like 38 like 1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RGD

Process Evidence Code Pubs
involved_in negative regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
  
involved_in negative regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
  
involved_in negative regulation of cell differentiation IEA
Inferred from Electronic Annotation
more info
  
involved_in positive regulation of cell population proliferation IEA
Inferred from Electronic Annotation
more info
  

General protein information

Go to the top of the page Help
Preferred Names
PRAME family member 8-like; similar to DNA segment, Chr 5, ERATO Doi 577, expressed

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086032.1 Reference GRCr8

    Range
    14469873..14472505
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_577327.3 → XP_577327.1  PRAME family member 8-like isoform X1

    UniProtKB/TrEMBL
    A0A8I6A5E7, A0A8I6AHD7
    Related
    ENSRNOP00000086479.1, ENSRNOT00000098433.1
    Conserved Domains (1) summary
    cd00116
    Location:320 → 395
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...

  2. XM_008769912.2 → XP_008768134.1  PRAME family member 8-like isoform X2

    UniProtKB/TrEMBL
    A0A8I6A8Z8
    Related
    ENSRNOP00000087954.1, ENSRNOT00000119077.1
    Conserved Domains (1) summary
    cd00116
    Location:122 → 197
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases