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Mageb7 MAGE family member B7 [ Rattus norvegicus (Norway rat) ]

Gene ID: 503442, updated on 13-Apr-2024

Summary

Official Symbol
Mageb7provided by RGD
Official Full Name
MAGE family member B7provided by RGD
Primary source
RGD:1563904
See related
Ensembl:ENSRNOG00000042751 AllianceGenome:RGD:1563904
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1563904
Expression
Restricted expression toward (RPKM 16.5) See more
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Genomic context

See Mageb7 in Genome Data Viewer
Location:
Xq21
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) X NC_086039.1 (54916581..54919884, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) X NC_051356.1 (50965892..50969116, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) X NC_005120.4 (54938470..54941813, complement)

Chromosome X - NC_086039.1Genomic Context describing neighboring genes Neighboring gene MAGE family member B1-like 1 Neighboring gene MAGE family member B1 Neighboring gene aldo-keto reductase family 1, member B8, pseudogene 5 Neighboring gene interleukin 1 receptor accessory protein-like 1 Neighboring gene proteasome 20S subunit beta 3, pseudogene 7

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

General protein information

Preferred Names
MAGE family member B7
Names
melanoma antigen, family B, 7

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001109367.2NP_001102837.1  MAGE family member B7

    See identical proteins and their annotated locations for NP_001102837.1

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000021
    UniProtKB/TrEMBL
    A0A8I5ZWY3, A6IPX3
    Related
    ENSRNOP00000083438.1, ENSRNOT00000065450.3
    Conserved Domains (2) summary
    pfam01454
    Location:115279
    MAGE; MAGE family
    pfam12440
    Location:591
    MAGE_N; Melanoma associated antigen family N terminal

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086039.1 Reference GRCr8

    Range
    54916581..54919884 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063280264.1XP_063136334.1  MAGE family member B7 isoform X1

    UniProtKB/TrEMBL
    A0A8I5ZWY3, A6IPX3