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PVX_083125 lipoyl synthase, putative [ Plasmodium vivax (malaria parasite P. vivax) ]

Gene ID: 5473509, updated on 16-Nov-2023

Summary

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Gene symbol
PVX_083125
Gene description
lipoyl synthase, putative
Locus tag
PVX_083125
Gene type
protein coding
RNA name
lipoyl synthase, putative
RefSeq status
PROVISIONAL
Organism
Plasmodium vivax (strain: Salvador I)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Plasmodium)
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Genomic context

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Location:
chromosome: 12
Exon count:
1
Sequence:
Chromosome: 12; NC_009917.1 (382258..383883, complement)

Chromosome 12 - NC_009917.1Genomic Context describing neighboring genes Neighboring gene aspartate carbamoyltransferase, putative Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009917.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomics of the neglected human malaria parasite Plasmodium vivax. Carlton JM, et al. Nature, 2008 Oct 9. PMID 18843361, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Repeated regions

  • Loc: c382588-382569 rpt_type = tandem , rpt_unit_seq = a , satellite = microsatellite
  • Loc: c382643-382613 rpt_type = tandem , rpt_unit_seq = cag , satellite = microsatellite

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 4 iron, 4 sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables lipoate synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipoate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lipoyl synthase, putative
XP_001614224.1
  • encoded by transcript PVX_083125A; Possible apicoplast targeted protein. Curated by Stuart Ralph, Walter and Eliza Hall Institute of Medical Research, Australia.

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009917.1 Reference assembly

    Range
    382258..383883 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001614174.1 → XP_001614224.1  lipoyl synthase, putative [Plasmodium vivax]

    See identical proteins and their annotated locations for XP_001614224.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    A5K883
    UniProtKB/TrEMBL
    A0A0J9S917, A0A0J9T6X8, A0A0J9TRY7, A0A0J9VFJ5, A0A1G4HG90
    Conserved Domains (1) summary
    PTZ00413
    Location:3 → 440
    PTZ00413; lipoate synthase; Provisional
Nucleotide Protein
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