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PVX_083135 aspartate carbamoyltransferase, putative [ Plasmodium vivax (malaria parasite P. vivax) ]

Gene ID: 5473511, updated on 16-Nov-2023

Summary

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Gene symbol
PVX_083135
Gene description
aspartate carbamoyltransferase, putative
Locus tag
PVX_083135
Gene type
protein coding
RNA name
aspartate carbamoyltransferase, putative
RefSeq status
PROVISIONAL
Organism
Plasmodium vivax (strain: Salvador I)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Plasmodium)
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Genomic context

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Location:
chromosome: 12
Exon count:
3
Sequence:
Chromosome: 12; NC_009917.1 (375354..377414, complement)

Chromosome 12 - NC_009917.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene lipoyl synthase, putative

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009917.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomics of the neglected human malaria parasite Plasmodium vivax. Carlton JM, et al. Nature, 2008 Oct 9. PMID 18843361, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables amino acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables aspartate carbamoyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in 'de novo' pyrimidine nucleobase biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in amino acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aspartate carbamoyltransferase, putative
XP_001614226.1
  • encoded by transcript PVX_083135A; Apicoplast targeted protein. Curated by Stuart Ralph, Walter and Eliza Hall Institute of Medical Research, Australia.

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009917.1 Reference assembly

    Range
    375354..377414 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001614176.1 → XP_001614226.1  aspartate carbamoyltransferase, putative [Plasmodium vivax]

    See identical proteins and their annotated locations for XP_001614226.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0J9SBC2, A0A0J9SRH4, A0A0J9TTY5, A0A0J9VUG6, A0A1G4HGB0, A5K885
    Conserved Domains (3) summary
    PRK00856
    Location:55 → 370
    pyrB; aspartate carbamoyltransferase catalytic subunit; Provisional
    pfam00185
    Location:213 → 370
    OTCace; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
    pfam02729
    Location:59 → 199
    OTCace_N; Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
Nucleotide Protein
Heading Accession and Version

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