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PVX_089180 lipoate-protein ligase, putative [ Plasmodium vivax (malaria parasite P. vivax) ]

Gene ID: 5474217, updated on 17-May-2024

Summary

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Gene symbol
PVX_089180
Gene description
lipoate-protein ligase, putative
Primary source
PlasmoDB:PVX_089180
Locus tag
PVX_089180
Gene type
protein coding
RNA name
lipoate-protein ligase, putative
RefSeq status
PROVISIONAL
Organism
Plasmodium vivax (strain: Salvador I)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Plasmodium)
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Genomic context

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Location:
chromosome: 5
Exon count:
1
Sequence:
Chromosome: 5; NC_009910.1 (363231..364559)

Chromosome 5 - NC_009910.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein, conserved Neighboring gene hypothetical protein, conserved Neighboring gene hypothetical protein, conserved Neighboring gene hypothetical protein, conserved

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009910.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomics of the neglected human malaria parasite Plasmodium vivax. Carlton JM, et al. Nature, 2008 Oct 9. PMID 18843361, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Repeated regions

  • Loc: 363809-363830 rpt_type = tandem , rpt_unit_seq = a , satellite = microsatellite
  • Loc: 363834-363854 rpt_type = tandem , rpt_unit_seq = ta , satellite = microsatellite
  • Loc: 364220-364257 rpt_type = tandem , rpt_unit_seq = t , satellite = microsatellite

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lipoyl(octanoyl) transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein lipoylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lipoate-protein ligase, putative
XP_001614926.1
  • encoded by transcript PVX_089180A; Apicoplast targeted protein. Curated by Stuart Ralph, Walter and Eliza Hall Institute of Medical Research, Australia.

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009910.1 Reference assembly

    Range
    363231..364559
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001614876.1 → XP_001614926.1  lipoate-protein ligase, putative [Plasmodium vivax]

    See identical proteins and their annotated locations for XP_001614926.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0J9SGB7, A0A0J9SYW6, A0A0J9TI33, A0A0J9U056, A0A1G4GTB6, A5K5L4
    Conserved Domains (1) summary
    cl14057
    Location:74 → 390
    BPL_LplA_LipB; biotin-lipoate ligase family
Nucleotide Protein
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