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PVX_113600 ornithine aminotransferase, putative [ Plasmodium vivax (malaria parasite P. vivax) ]

Gene ID: 5475410, updated on 17-May-2024

Summary

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Gene symbol
PVX_113600
Gene description
ornithine aminotransferase, putative
Primary source
PlasmoDB:PVX_113600
Locus tag
PVX_113600
Gene type
protein coding
RNA name
ornithine aminotransferase, putative
RefSeq status
PROVISIONAL
Organism
Plasmodium vivax (strain: Salvador I)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Plasmodium)
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Genomic context

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Location:
chromosome: 11
Exon count:
3
Sequence:
Chromosome: 11; NC_009916.1 (1671898..1674268, complement)

Chromosome 11 - NC_009916.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene tRNA-Ala Neighboring gene hypothetical protein Neighboring gene T-complex protein 1, zeta subunit, putative Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009916.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomics of the neglected human malaria parasite Plasmodium vivax. Carlton JM, et al. Nature, 2008 Oct 9. PMID 18843361, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Repeated regions

  • Loc: c1672227-1672192 rpt_type = tandem , rpt_unit_seq = a , satellite = microsatellite
  • Loc: c1674022-1673991 rpt_type = tandem , rpt_unit_seq = a , satellite = microsatellite

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables identical protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ornithine aminotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in arginine catabolic process to glutamate IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in arginine catabolic process to proline via ornithine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ornithine aminotransferase, putative
XP_001616111.1
  • encoded by transcript PVX_113600A

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009916.1 Reference assembly

    Range
    1671898..1674268 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001616061.1 → XP_001616111.1  ornithine aminotransferase, putative [Plasmodium vivax]

    See identical proteins and their annotated locations for XP_001616111.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0J9S9T7, A0A0J9TC28, A0A0J9TSR0, A0A0J9VGH8, A0A1G4HFS3, A0A564ZXP5, A5K1T4
    Conserved Domains (1) summary
    PTZ00125
    Location:16 → 414
    PTZ00125; ornithine aminotransferase-like protein; Provisional
Nucleotide Protein
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