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Spag11b sperm associated antigen 11b [ Rattus norvegicus (Norway rat) ]

Gene ID: 652998, discontinued on 2-May-2024

Summary

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Official Symbol
Spag11bprovided by RGD
Official Full Name
sperm associated antigen 11bprovided by RGD
Primary source
RGD:1562239
Gene type
protein coding
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Spag11c
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Genomic context

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Location:
16q12.5
Exon count:
3
Annotation release Status Assembly Chr Location
106 latest, but not current Rn_Celera (GCF_000002265.2) 16 AC_000084.1 (68565073..68567020, complement)

Genomic regions, transcripts, and products

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Genomic Sequence:
AC_000084.1 Chromosome 16 Alternate Rn_Celera

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Dynamic changes in the spatio-temporal expression of the β-defensin SPAG11C in the developing rat epididymis and its regulation by androgens. Ribeiro CM, et al. Mol Cell Endocrinol, 2015 Mar 15. PMID 25657045
  2. Antimicrobial actions of human and macaque sperm associated antigen (SPAG) 11 isoforms: influence of the N-terminal peptide. Yenugu S, et al. Mol Cell Biochem, 2006 Mar. PMID 16411022
  3. Cross-species analysis of the mammalian beta-defensin gene family: presence of syntenic gene clusters and preferential expression in the male reproductive tract. Patil AA, et al. Physiol Genomics, 2005 Sep 21. PMID 16033865
  4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Names
sperm associated antigen 11b
sperm associated antigen 11C
sperm-associated antigen 11B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 106 (NOTE: not current)

The following sections contain reference sequences that belong to a specific genome build. Explain

Alternate Rn_Celera

Genomic

  1. AC_000084.1 Alternate Rn_Celera

    Range
    68565073..68567020 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001037850.1 → NP_001032939.1  

    Conserved Domains (1) summary
    pfam05324
    Location:5 → 72
    Sperm_Ag_HE2; Sperm antigen HE2

  2. NM_001037852.1 → NP_001032941.1  

    See identical proteins and their annotated locations for NP_001032941.1

    Conserved Domains (1) summary
    pfam05324
    Location:41 → 92
    Sperm_Ag_HE2; Sperm antigen HE2

Gene LinkOut

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