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Coq10b coenzyme Q10B [ Mus musculus (house mouse) ]

Gene ID: 67876, updated on 9-May-2024

Summary

Official Symbol
Coq10bprovided by MGI
Official Full Name
coenzyme Q10Bprovided by MGI
Primary source
MGI:MGI:1915126
See related
Ensembl:ENSMUSG00000025981 AllianceGenome:MGI:1915126
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
1500041J02Rik; 1700030I21Rik; 9530077A17Rik
Summary
Predicted to enable ubiquinone binding activity. Predicted to be involved in cellular respiration and ubiquinone biosynthetic process. Located in mitochondrion. Orthologous to human COQ10B (coenzyme Q10B). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in bladder adult (RPKM 24.6), adrenal adult (RPKM 11.2) and 28 other tissues See more
Orthologs
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Genomic context

Location:
1 C1.2; 1 28.0 cM
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (55091929..55111861)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (55052770..55072702)

Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 4930444A19 gene Neighboring gene ankyrin repeat domain 44 Neighboring gene STARR-seq mESC enhancer starr_00938 Neighboring gene STARR-positive B cell enhancer ABC_E4315 Neighboring gene STARR-positive B cell enhancer mm9_chr1:54898672-54898972 Neighboring gene STARR-seq mESC enhancer starr_00940 Neighboring gene STARR-positive B cell enhancer ABC_E11069 Neighboring gene CapStarr-seq enhancer MGSCv37_chr1:54970246-54970399 Neighboring gene STARR-positive B cell enhancer ABC_E11070 Neighboring gene STARR-seq mESC enhancer starr_00941 Neighboring gene STARR-seq mESC enhancer starr_00942 Neighboring gene splicing factor 3b, subunit 1 Neighboring gene STARR-seq mESC enhancer starr_00943 Neighboring gene STARR-positive B cell enhancer ABC_E7728 Neighboring gene ribosomal protein S2 pseudogene Neighboring gene STARR-seq mESC enhancer starr_00944 Neighboring gene heat shock protein 1 (chaperonin) Neighboring gene heat shock protein 1 (chaperonin 10) Neighboring gene ribosomal protein L7A pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 
  • Targeted (1) 

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables ubiquinone binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in cellular respiration IEA
Inferred from Electronic Annotation
more info
 
involved_in ubiquinone biosynthetic process IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in mitochondrial inner membrane IEA
Inferred from Electronic Annotation
more info
 
located_in mitochondrion HDA PubMed 
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
coenzyme Q-binding protein COQ10 homolog B, mitochondrial
Names
coenzyme Q10 homolog B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001039710.1NP_001034799.1  coenzyme Q-binding protein COQ10 homolog B, mitochondrial isoform 1

    See identical proteins and their annotated locations for NP_001034799.1

    Status: VALIDATED

    Source sequence(s)
    AI462376, AK015454, AK168837
    Consensus CDS
    CCDS35568.1
    UniProtKB/Swiss-Prot
    Q3THF9, Q6P6N0, Q9D9R6
    UniProtKB/TrEMBL
    A0A0R4J066
    Related
    ENSMUSP00000027125.6, ENSMUST00000027125.7
    Conserved Domains (1) summary
    cd07813
    Location:82220
    COQ10p_like; Coenzyme Q-binding protein COQ10p and similar proteins
  2. NM_026424.3NP_080700.3  coenzyme Q-binding protein COQ10 homolog B, mitochondrial isoform 2

    See identical proteins and their annotated locations for NP_080700.3

    Status: VALIDATED

    Source sequence(s)
    AI462376, AK006551, AK015454, AK168837
    Consensus CDS
    CCDS14959.1
    UniProtKB/TrEMBL
    G5E8J7
    Related
    ENSMUSP00000084899.5, ENSMUST00000087617.11
    Conserved Domains (1) summary
    cd07813
    Location:36170
    COQ10p_like; Coenzyme Q-binding protein COQ10p and similar proteins

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000067.7 Reference GRCm39 C57BL/6J

    Range
    55091929..55111861
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)