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Zfp326 zinc finger protein 326 [ Rattus norvegicus (Norway rat) ]

Gene ID: 682914, updated on 5-Mar-2024

Summary

Official Symbol
Zfp326provided by RGD
Official Full Name
zinc finger protein 326provided by RGD
Primary source
RGD:1592829
See related
Ensembl:ENSRNOG00000047761 AllianceGenome:RGD:1592829
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Predicted to enable DNA binding activity; RNA polymerase II complex binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription, elongation and regulation of RNA splicing. Predicted to act upstream of or within positive regulation of transcription, DNA-templated. Predicted to be located in nuclear matrix and nucleoplasm. Predicted to be part of DBIRD complex. Orthologous to human ZNF326 (zinc finger protein 326). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in Thymus (RPKM 55.5), Adrenal (RPKM 51.1) and 9 other tissues See more
Orthologs
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Genomic context

See Zfp326 in Genome Data Viewer
Location:
14p22
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 14 NC_086032.1 (4246081..4286805, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 14 NC_051349.1 (3941210..3980419, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 14 NC_005113.4 (5016764..5036663, complement) , (4998530..5006759, complement)

Chromosome 14 - NC_086032.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102551594 Neighboring gene uncharacterized LOC108352694 Neighboring gene uncharacterized LOC120096556 Neighboring gene leucine rich repeat containing 8 VRAC subunit D

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

General gene information

Markers

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables DNA binding ISO
Inferred from Sequence Orthology
more info
 
enables RNA polymerase II complex binding ISO
Inferred from Sequence Orthology
more info
 
enables zinc ion binding ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
involved_in RNA splicing IEA
Inferred from Electronic Annotation
more info
 
involved_in mRNA processing IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within positive regulation of DNA-templated transcription ISO
Inferred from Sequence Orthology
more info
 
involved_in regulation of DNA-templated transcription elongation ISO
Inferred from Sequence Orthology
more info
 
involved_in regulation of RNA splicing ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
part_of DBIRD complex ISO
Inferred from Sequence Orthology
more info
 
located_in intracellular membrane-bounded organelle ISO
Inferred from Sequence Orthology
more info
 
located_in nuclear matrix ISO
Inferred from Sequence Orthology
more info
 
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in nucleoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in nucleus ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
DBIRD complex subunit ZNF326

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086032.1 Reference GRCr8

    Range
    4246081..4286805 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039092634.2XP_038948562.1  DBIRD complex subunit ZNF326 isoform X2

    UniProtKB/TrEMBL
    A0A096MKE5
    Conserved Domains (1) summary
    pfam04988
    Location:322457
    AKAP95; A-kinase anchoring protein 95 (AKAP95)
  2. XM_039092633.2XP_038948561.1  DBIRD complex subunit ZNF326 isoform X1

    UniProtKB/TrEMBL
    A0A096MKE5
    Related
    ENSRNOP00000068484.2
    Conserved Domains (1) summary
    pfam04988
    Location:337472
    AKAP95; A-kinase anchoring protein 95 (AKAP95)
  3. XM_063273731.1XP_063129801.1  DBIRD complex subunit ZNF326 isoform X4

  4. XM_039092635.2XP_038948563.1  DBIRD complex subunit ZNF326 isoform X3

    Conserved Domains (1) summary
    pfam04988
    Location:337392
    AKAP95; A-kinase anchoring protein 95 (AKAP95)
  5. XM_063273732.1XP_063129802.1  DBIRD complex subunit ZNF326 isoform X5