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Mpzl1 myelin protein zero-like 1 [ Mus musculus (house mouse) ]

Gene ID: 68481, updated on 12-May-2024

Summary

Official Symbol
Mpzl1provided by MGI
Official Full Name
myelin protein zero-like 1provided by MGI
Primary source
MGI:MGI:1915731
See related
Ensembl:ENSMUSG00000026566 AllianceGenome:MGI:1915731
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
PZR; 1110007A10Rik
Summary
Acts upstream of or within positive regulation of cell migration. Predicted to be located in membrane. Predicted to be integral component of plasma membrane. Predicted to be active in plasma membrane. Is expressed in several structures, including adipose tissue; alimentary system; hemolymphoid system gland; nervous system; and reproductive system. Orthologous to human MPZL1 (myelin protein zero like 1). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in placenta adult (RPKM 77.0), limb E14.5 (RPKM 61.2) and 26 other tissues See more
Orthologs
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Genomic context

See Mpzl1 in Genome Data Viewer
Location:
1 H2.3; 1 72.94 cM
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (165419745..165462144, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (165592176..165634541, complement)

Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene adenylate cyclase 10 Neighboring gene predicted gene, 51751 Neighboring gene predicted gene, 51750 Neighboring gene STARR-positive B cell enhancer mm9_chr1:167509733-167510033 Neighboring gene STARR-positive B cell enhancer ABC_E11103 Neighboring gene STARR-positive B cell enhancer ABC_E4372 Neighboring gene STARR-positive B cell enhancer ABC_E324 Neighboring gene STARR-positive B cell enhancer ABC_E1570 Neighboring gene nuclear encoded tRNA proline 2 (anticodon AGG) Neighboring gene nuclear encoded tRNA proline 2 (anticodon CGG)

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
myelin protein zero-like protein 1
Names
protein zero-related

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001001880.2NP_001001880.1  myelin protein zero-like protein 1 isoform b precursor

    See identical proteins and their annotated locations for NP_001001880.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks an exon in the 3' coding region, compared to variant 1, that causes a frameshift. The resulting protein (isoform b) has a shorter and distinct C-terminus, compared to isoform a.
    Source sequence(s)
    BB871672, BC072563, CX210059
    Consensus CDS
    CCDS35758.1
    UniProtKB/TrEMBL
    A0A0A6YW22, A0A0R4J0V2
    Related
    ENSMUSP00000070343.8, ENSMUST00000068705.13
    Conserved Domains (2) summary
    cd05715
    Location:39154
    Ig_P0-like; Immunoglobulin (Ig)-like domain of Protein zero (P0) and similar proteins
    smart00410
    Location:43154
    IG_like; Immunoglobulin like
  2. NM_001083897.1NP_001077366.1  myelin protein zero-like protein 1 isoform a precursor

    See identical proteins and their annotated locations for NP_001077366.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (a).
    Source sequence(s)
    AK169385, BB871672, CX210059
    Consensus CDS
    CCDS35757.1
    UniProtKB/Swiss-Prot
    Q2VW02, Q3TEW6, Q6GQX5
    UniProtKB/TrEMBL
    A0A0A6YWA2
    Related
    ENSMUSP00000107062.3, ENSMUST00000111435.9
    Conserved Domains (2) summary
    cd00096
    Location:3842
    Ig; Ig strand A [structural motif]
    cl11960
    Location:38154
    Ig; Immunoglobulin domain
  3. NM_001347128.1NP_001334057.1  myelin protein zero-like protein 1 isoform c precursor

    Status: VALIDATED

    Source sequence(s)
    AC102776
    Consensus CDS
    CCDS83623.1
    UniProtKB/TrEMBL
    A0A0A6YXW1
    Related
    ENSMUSP00000142164.2, ENSMUST00000194437.6
    Conserved Domains (1) summary
    cl11960
    Location:3986
    Ig; Immunoglobulin domain

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000067.7 Reference GRCm39 C57BL/6J

    Range
    165419745..165462144 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_004934160.1 RNA Sequence