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LOC686042 hypothetical protein LOC686042 [ Rattus norvegicus (Norway rat) ]

Gene ID: 686042, updated on 29-Feb-2024

Summary

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Symbol
LOC686042provided by RGD
Full Name
hypothetical protein LOC686042provided by RGD
Primary source
RGD:1586654
See related
Ensembl:ENSRNOG00000063299 AllianceGenome:RGD:1586654
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Orthologous to human FANCD2OS (FANCD2 opposite strand). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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See LOC686042 in Genome Data Viewer
Location:
Xq13
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) X NC_086039.1 (30528100..30529367)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) X NC_051356.1 (26911173..26912427)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 13 NC_005112.4 (100188555..100189813, complement)

Chromosome X - NC_086039.1Genomic Context describing neighboring genes Neighboring gene FANCD2 opposite strand like 1 Neighboring gene FANCD2 opposite strand protein-like Neighboring gene U6 spliceosomal RNA Neighboring gene phosphoribosyl pyrophosphate synthetase 2 Neighboring gene small nucleolar RNA SNORA70

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
FANCD2 opposite strand protein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086039.1 Reference GRCr8

    Range
    30528100..30529367
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006250422.4 → XP_006250484.1  FANCD2 opposite strand protein-like

    See identical proteins and their annotated locations for XP_006250484.1

    UniProtKB/TrEMBL
    M0R6E3
    Related
    ENSRNOP00000064991.1
    Conserved Domains (1) summary
    pfam15124
    Location:4 → 180
    DUF4563; Domain of unknown function (DUF4563)
Nucleotide Protein Strain
Heading Accession and Version

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