U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Krtap10-10l2 keratin associated protein 10-10 like 2 [ Rattus norvegicus (Norway rat) ]

Gene ID: 690415, updated on 29-Feb-2024

Summary

Go to the top of the page Help
Official Symbol
Krtap10-10l2provided by RGD
Official Full Name
keratin associated protein 10-10 like 2provided by RGD
Primary source
RGD:1596091
See related
Ensembl:ENSRNOG00000069553 AllianceGenome:RGD:1596091
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Expression
Biased expression in Muscle (RPKM 1.2), Spleen (RPKM 0.6) and 7 other tissues See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Krtap10-10l2 in Genome Data Viewer
Location:
20p12
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 20 NC_086038.1 (10844725..10845876)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 20 NC_051355.1 (10845110..10846261)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 20 NC_005119.4 (11561438..11562589)

Chromosome 20 - NC_086038.1Genomic Context describing neighboring genes Neighboring gene thrombospondin-type laminin G domain and EAR repeats Neighboring gene keratin-associated protein 10-1-like Neighboring gene keratin-associated protein 10-11-like Neighboring gene keratin associated protein 10-10 Neighboring gene keratin associated protein 10-8

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Gene Ontology Provided by RGD

Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
  
located_in keratin filament IEA
Inferred from Electronic Annotation
more info
  

General protein information

Go to the top of the page Help
Preferred Names
uncharacterized protein LOC690415

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001109590.1 → NP_001103060.1  uncharacterized protein LOC690415

    See identical proteins and their annotated locations for NP_001103060.1

    Status: PREDICTED

    Source sequence(s)
    CH473988
    UniProtKB/TrEMBL
    A0A8I6APD8, A6JK67
    Related
    ENSRNOP00000096464.1, ENSRNOT00000102721.1
    Conserved Domains (1) summary
    pfam13885
    Location:23 → 63
    Keratin_B2_2; Keratin, high sulfur B2 protein

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086038.1 Reference GRCr8

    Range
    10844725..10845876
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008772833.1 → XP_008771055.1  uncharacterized protein LOC690415 isoform X2

    Conserved Domains (1) summary
    pfam13885
    Location:23 → 63
    Keratin_B2_2; Keratin, high sulfur B2 protein

  2. XM_063279530.1 → XP_063135600.1  uncharacterized protein LOC690415 isoform X1

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials