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PHATRDRAFT_29736 hypothetical protein [ Phaeodactylum tricornutum CCAP 1055/1 ]

Gene ID: 7194847, updated on 21-Dec-2023

Summary

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Gene symbol
PHATRDRAFT_29736
Gene description
hypothetical protein
Locus tag
PHATRDRAFT_29736
Gene type
protein coding
RNA name
predicted protein
RefSeq status
PROVISIONAL
Organism
Phaeodactylum tricornutum CCAP 1055/1 (strain: CCAP 1055/1)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Bacillariophyceae; Bacillariophycidae; Naviculales; Phaeodactylaceae; Phaeodactylum
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Genomic context

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Location:
chromosome: 18
Exon count:
1
Sequence:
Chromosome: 18; NC_011686.1 (484898..485815, complement)

Chromosome 18 - NC_011686.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene caltractin Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_011686.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables urate oxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in purine nucleobase catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in urate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_011686.1 Reference assembly

    Range
    484898..485815 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002183197.1 → XP_002183233.1  predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]

    See identical proteins and their annotated locations for XP_002183233.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8J9X6U4, B7G802
    Conserved Domains (1) summary
    cl00263
    Location:2 → 245
    TFold; Tunnelling fold (T-fold). The five known T-folds are found in five different enzymes with different functions: dihydroneopterin-triphosphate epimerase (DHNTPE), dihydroneopterin aldolase (DHNA) , GTP cyclohydrolase I (GTPCH-1), 6-pyrovoyl ...
Nucleotide Protein
Heading Accession and Version

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