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PsbM photosystem II subunit [ Phaeodactylum tricornutum CCAP 1055/1 ]

Gene ID: 7195719, updated on 21-Dec-2023

Summary

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Gene symbol
PsbM
Gene description
photosystem II subunit
Locus tag
PHATRDRAFT_55057
Gene type
protein coding
RNA name
photosystem II subunit
RefSeq status
PROVISIONAL
Organism
Phaeodactylum tricornutum CCAP 1055/1 (strain: CCAP 1055/1)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Bacillariophyceae; Bacillariophycidae; Naviculales; Phaeodactylaceae; Phaeodactylum
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Genomic context

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See PsbM in Genome Data Viewer
Location:
chromosome: 22
Exon count:
2
Sequence:
Chromosome: 22; NC_011690.1 (402885..403769)

Chromosome 22 - NC_011690.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene protein fucoxanthin chl a/c protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_011690.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in photosynthesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in photosynthesis, light reaction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of photosystem II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
photosystem II subunit
XP_002184128.1
  • Photosystem II subunit M, contains plastid targeting sequence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_011690.1 Reference assembly

    Range
    402885..403769
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002184092.1 → XP_002184128.1  photosystem II subunit [Phaeodactylum tricornutum CCAP 1055/1]

    See identical proteins and their annotated locations for XP_002184128.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B7GAS5, Q84XB8
    Conserved Domains (1) summary
    PLN00090
    Location:1 → 108
    PLN00090; photosystem II reaction center M protein; Provisional
Nucleotide Protein
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