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TRG-TCC1-1 tRNA-Gly (anticodon TCC) 1-1 [ Homo sapiens (human) ]

Gene ID: 7197, updated on 10-Oct-2023

Summary

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Official Symbol
TRG-TCC1-1provided by HGNC
Official Full Name
tRNA-Gly (anticodon TCC) 1-1provided by HGNC
Primary source
HGNC:HGNC:12274
See related
MIM:615303; AllianceGenome:HGNC:12274
Gene type
tRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TRG3; TRNAG3
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Genomic context

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Location:
19p13.3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 19 NC_000019.10 (4724070..4724141)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 19 NC_060943.1 (4708387..4708458)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (4724082..4724153)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:4660681-4661180 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:4661482-4662252 Neighboring gene myeloid derived growth factor Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 9901 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr19:4675983-4676943 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:4679601-4680102 Neighboring gene DPP9 antisense RNA 1 Neighboring gene dipeptidyl peptidase 9 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr19:4694063-4695262 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr19:4703720-4704919 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr19:4713085-4714284 Neighboring gene uncharacterized LOC105372250 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 9902 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 9903 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 9904 Neighboring gene tRNA-Val (anticodon CAC) 3-1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:4738040-4738540 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:4738541-4739041 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:4742625-4743225 Neighboring gene Sharpr-MPRA regulatory region 10046 Neighboring gene Sharpr-MPRA regulatory region 15136 Neighboring gene MIR7-3 host gene Neighboring gene microRNA 7-3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The first human genes for tRNA(ArgICG), tRNA(GlyUCC), and tRNA(ThrIGU) and more tRNA(Val) pseudogenes: expression and pre-tRNA maturation in HeLa cell-free extracts. Kaçar Y, et al. DNA Cell Biol, 1992 Dec. PMID 1457046
  2. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. Chan PP, et al. Nucleic Acids Res, 2009 Jan. PMID 18984615, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • tRNA glycine (UCC) 3
  • tRNA glycine 3 (anticodon UCC)
  • tRNA-Gly (TCC) 1-1
  • transfer RNA glycine 3 (anticodon UCC)
  • transfer RNA-Gly (TCC) 1-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000019.10 Reference GRCh38.p14 Primary Assembly

    Range
    4724070..4724141
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060943.1 Alternate T2T-CHM13v2.0

    Range
    4708387..4708458
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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