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HemA glutamyl-trna reductase [ Phaeodactylum tricornutum CCAP 1055/1 ]

Gene ID: 7197242, updated on 21-Dec-2023

Summary

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Gene symbol
HemA
Gene description
glutamyl-trna reductase
Locus tag
PHATRDRAFT_54134
Gene type
protein coding
RNA name
glutamyl-trna reductase
RefSeq status
PROVISIONAL
Organism
Phaeodactylum tricornutum CCAP 1055/1 (strain: CCAP 1055/1)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Bacillariophyceae; Bacillariophycidae; Naviculales; Phaeodactylaceae; Phaeodactylum
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Genomic context

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Location:
chromosome: 2
Exon count:
3
Sequence:
Chromosome: 2; NC_011670.1 (1232245..1234274)

Chromosome 2 - NC_011670.1Genomic Context describing neighboring genes Neighboring gene predicted protein Neighboring gene predicted protein Neighboring gene predicted protein Neighboring gene predicted protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_011670.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NADP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glutamyl-tRNA reductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tetrapyrrole biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
glutamyl-trna reductase
XP_002177785.1
  • second step in heme biosynthesis, contains ER signal peptide (SignalP score 0.994), putatively chloroplast targeted

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_011670.1 Reference assembly

    Range
    1232245..1234274
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002177749.1 → XP_002177785.1  glutamyl-trna reductase [Phaeodactylum tricornutum CCAP 1055/1]

    See identical proteins and their annotated locations for XP_002177785.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B7FT63
    Conserved Domains (3) summary
    cd05213
    Location:73 → 393
    NAD_bind_Glutamyl_tRNA_reduct; NADP-binding domain of glutamyl-tRNA reductase
    PLN00203
    Location:8 → 503
    PLN00203; glutamyl-tRNA reductase
    pfam00745
    Location:397 → 491
    GlutR_dimer; Glutamyl-tRNAGlu reductase, dimerization domain
Nucleotide Protein
Heading Accession and Version

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