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PHATRDRAFT_23811 hypothetical protein [ Phaeodactylum tricornutum CCAP 1055/1 ]

Gene ID: 7198852, updated on 21-Dec-2023

Summary

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Gene symbol
PHATRDRAFT_23811
Gene description
hypothetical protein
Locus tag
PHATRDRAFT_23811
Gene type
protein coding
RNA name
predicted protein
RefSeq status
PROVISIONAL
Organism
Phaeodactylum tricornutum CCAP 1055/1 (strain: CCAP 1055/1)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Bacillariophyceae; Bacillariophycidae; Naviculales; Phaeodactylaceae; Phaeodactylum
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Genomic context

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Location:
chromosome: 27
Exon count:
1
Sequence:
Chromosome: 27; NC_011695.1 (202507..205113, complement)

Chromosome 27 - NC_011695.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene chitinase chitin binding glycoside hydrolase family 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_011695.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables S-methyl-5-thioribose kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in methionine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_011695.1 Reference assembly

    Range
    202507..205113 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002185031.1 → XP_002185067.1  predicted protein [Phaeodactylum tricornutum CCAP 1055/1]

    See identical proteins and their annotated locations for XP_002185067.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B7GD47
    Conserved Domains (4) summary
    PRK09550
    Location:434 → 815
    mtnK; methylthioribose kinase; Reviewed
    TIGR00512
    Location:10 → 367
    salvage_mtnA; S-methyl-5-thioribose-1-phosphate isomerase
    pfam01008
    Location:52 → 367
    IF-2B; Initiation factor 2 subunit family
    pfam01636
    Location:437 → 705
    APH; Phosphotransferase enzyme family
Nucleotide Protein
Heading Accession and Version

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