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HAD1 3-hydroxyacyl-coenzyme A dehydrogenase [ Phaeodactylum tricornutum CCAP 1055/1 ]

Gene ID: 7199634, updated on 21-Dec-2023

Summary

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Gene symbol
HAD1
Gene description
3-hydroxyacyl-coenzyme A dehydrogenase
Locus tag
PHATRDRAFT_41886
Gene type
protein coding
RNA name
3-hydroxyacyl-coenzyme A dehydrogenase
RefSeq status
PROVISIONAL
Organism
Phaeodactylum tricornutum CCAP 1055/1 (strain: CCAP 1055/1)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Bacillariophyceae; Bacillariophycidae; Naviculales; Phaeodactylaceae; Phaeodactylum
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Genomic context

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Location:
chromosome: 5
Exon count:
3
Sequence:
Chromosome: 5; NC_011673.1 (798884..799782, complement)

Chromosome 5 - NC_011673.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_011673.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
3-hydroxyacyl-coenzyme A dehydrogenase
XP_002179065.1
  • A short-chain dehydrogenase probably involved in mitochondrial butanoate metabolism catalyzing the reaction: (S)-3-hydroxyacyl-CoA + NAD+ = 3-oxoacyl-CoA + NADH.

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_011673.1 Reference assembly

    Range
    798884..799782 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002179029.1 → XP_002179065.1  3-hydroxyacyl-coenzyme A dehydrogenase [Phaeodactylum tricornutum CCAP 1055/1]

    See identical proteins and their annotated locations for XP_002179065.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B7FV18
    Conserved Domains (2) summary
    PRK08217
    Location:4 → 254
    fabG; 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
    cl21454
    Location:8 → 256
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
Nucleotide Protein
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