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AOX1 precursor of oxidase acyl-coa oxidase [ Phaeodactylum tricornutum CCAP 1055/1 ]

Gene ID: 7200599, updated on 21-Dec-2023

Summary

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Gene symbol
AOX1
Gene description
precursor of oxidase acyl-coa oxidase
Locus tag
PHATRDRAFT_19979
Gene type
protein coding
RNA name
precursor of oxidase acyl-coa oxidase
RefSeq status
PROVISIONAL
Organism
Phaeodactylum tricornutum CCAP 1055/1 (strain: CCAP 1055/1)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Bacillariophyceae; Bacillariophycidae; Naviculales; Phaeodactylaceae; Phaeodactylum
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Genomic context

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Location:
chromosome: 7
Exon count:
3
Sequence:
Chromosome: 7; NC_011675.1 (435282..437625)

Chromosome 7 - NC_011675.1Genomic Context describing neighboring genes Neighboring gene RAD50 recombination protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_011675.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables FAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables acyl-CoA oxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables fatty acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid beta-oxidation using acyl-CoA oxidase IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
precursor of oxidase acyl-coa oxidase
XP_002179644.1
  • Catalyzes the desaturation of very long chain acyl-CoA to 2-trans-enoyl-CoA. Acyl-CoA + O(2) = trans-2,3-dehydroacyl-CoA + H(2)O(2). Uses FAD cofactor. First step of peroxisomal fatty acid beta-oxidation.

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_011675.1 Reference assembly

    Range
    435282..437625
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002179608.1 → XP_002179644.1  precursor of oxidase acyl-coa oxidase [Phaeodactylum tricornutum CCAP 1055/1]

    See identical proteins and their annotated locations for XP_002179644.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B7FXZ0
    Conserved Domains (2) summary
    PLN02443
    Location:7 → 692
    PLN02443; acyl-coenzyme A oxidase
    cl09933
    Location:6 → 672
    ACAD; Acyl-CoA dehydrogenase
Nucleotide Protein
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