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ATPase-3A P3A, P type ATPase [ Phaeodactylum tricornutum CCAP 1055/1 ]

Gene ID: 7201040, updated on 21-Dec-2023

Summary

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Gene symbol
ATPase-3A
Gene description
P3A, P type ATPase
Locus tag
PHATRDRAFT_12452
Gene type
protein coding
RNA name
P3A, P type ATPase
RefSeq status
PROVISIONAL
Organism
Phaeodactylum tricornutum CCAP 1055/1 (strain: CCAP 1055/1)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Bacillariophyceae; Bacillariophycidae; Naviculales; Phaeodactylaceae; Phaeodactylum
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Genomic context

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Location:
chromosome: 8
Exon count:
5
Sequence:
Chromosome: 8; NC_011676.1 (824818..827528, complement)

Chromosome 8 - NC_011676.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_011676.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables P-type proton-exporting transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proton export across plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of intracellular pH IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
P3A, P type ATPase
XP_002180325.1
  • proton-transporting ATPase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_011676.1 Reference assembly

    Range
    824818..827528 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002180289.1 → XP_002180325.1  P3A, P type ATPase, partial [Phaeodactylum tricornutum CCAP 1055/1]

    See identical proteins and their annotated locations for XP_002180325.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B7FZC8
    Conserved Domains (4) summary
    COG4087
    Location:520 → 564
    COG4087; Soluble P-type ATPase [General function prediction only]
    TIGR01647
    Location:2 → 768
    ATPase-IIIA_H; plasma-membrane proton-efflux P-type ATPase
    pfam00122
    Location:61 → 279
    E1-E2_ATPase; E1-E2 ATPase
    pfam00690
    Location:1 → 49
    Cation_ATPase_N; Cation transporter/ATPase, N-terminus
Nucleotide Protein
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