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ZEP1 zeaxanthin epoxidase [ Phaeodactylum tricornutum CCAP 1055/1 ]

Gene ID: 7201093, updated on 21-Dec-2023

Summary

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Gene symbol
ZEP1
Gene description
zeaxanthin epoxidase
Locus tag
PHATRDRAFT_45845
Gene type
protein coding
RNA name
zeaxanthin epoxidase
RefSeq status
PROVISIONAL
Organism
Phaeodactylum tricornutum CCAP 1055/1 (strain: CCAP 1055/1)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Bacillariophyceae; Bacillariophycidae; Naviculales; Phaeodactylaceae; Phaeodactylum
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Genomic context

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Location:
chromosome: 8
Exon count:
1
Sequence:
Chromosome: 8; NC_011676.1 (450390..452226, complement)

Chromosome 8 - NC_011676.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene precursor of protein violaxanthin deepoxidase-like protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_011676.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables FAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
zeaxanthin epoxidase
XP_002180238.1
  • zeaxanthin epoxidase 1; expressed gene with similarity to zeaxanthin epoxidase, involved in xanthophyll cycling; chloroplast precursor

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_011676.1 Reference assembly

    Range
    450390..452226 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002180202.1 → XP_002180238.1  zeaxanthin epoxidase [Phaeodactylum tricornutum CCAP 1055/1]

    See identical proteins and their annotated locations for XP_002180238.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8J9S2H2, B7FYW4
    Conserved Domains (2) summary
    PRK06847
    Location:108 → 525
    PRK06847; hypothetical protein; Provisional
    cl21454
    Location:107 → 518
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
Nucleotide Protein
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