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PHATRDRAFT_27385 hypothetical protein [ Phaeodactylum tricornutum CCAP 1055/1 ]

Gene ID: 7201101, updated on 21-Dec-2023

Summary

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Gene symbol
PHATRDRAFT_27385
Gene description
hypothetical protein
Locus tag
PHATRDRAFT_27385
Gene type
protein coding
RNA name
predicted protein
RefSeq status
PROVISIONAL
Organism
Phaeodactylum tricornutum CCAP 1055/1 (strain: CCAP 1055/1)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Bacillariophyceae; Bacillariophycidae; Naviculales; Phaeodactylaceae; Phaeodactylum
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Genomic context

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Location:
chromosome: 8
Exon count:
1
Sequence:
Chromosome: 8; NC_011676.1 (492320..494492, complement)

Chromosome 8 - NC_011676.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene ferric reductase 1 Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_011676.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glutamine-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glutaminyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_011676.1 Reference assembly

    Range
    492320..494492 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002180212.1 → XP_002180248.1  predicted protein [Phaeodactylum tricornutum CCAP 1055/1]

    See identical proteins and their annotated locations for XP_002180248.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8J9X1D8, B7FYY2
    Conserved Domains (3) summary
    PRK05347
    Location:45 → 606
    PRK05347; glutaminyl-tRNA synthetase; Provisional
    pfam03950
    Location:381 → 576
    tRNA-synt_1c_C; tRNA synthetases class I (E and Q), anti-codon binding domain
    cl00015
    Location:45 → 383
    nt_trans; nucleotidyl transferase superfamily
Nucleotide Protein
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