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PHATR_10581 hypothetical protein [ Phaeodactylum tricornutum CCAP 1055/1 ]

Gene ID: 7204023, updated on 21-Dec-2023

Summary

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Gene symbol
PHATR_10581
Gene description
hypothetical protein
Locus tag
PHATR_10581
Gene type
protein coding
RNA name
predicted protein
RefSeq status
PROVISIONAL
Organism
Phaeodactylum tricornutum CCAP 1055/1 (strain: CCAP 1055/1)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Bacillariophyceae; Bacillariophycidae; Naviculales; Phaeodactylaceae; Phaeodactylum
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Genomic context

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Location:
chromosome: 3
Exon count:
1
Sequence:
Chromosome: 3; NC_011671.1 (905718..907319, complement)

Chromosome 3 - NC_011671.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_011671.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables NAD(P)+ transhydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables NADP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in NADPH regeneration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_011671.1 Reference assembly

    Range
    905718..907319 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002186398.1 → XP_002186434.1  predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]

    See identical proteins and their annotated locations for XP_002186434.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B5Y5A5
    Conserved Domains (3) summary
    PRK09424
    Location:3 → 532
    pntA; NAD(P) transhydrogenase subunit alpha; Provisional
    cd05304
    Location:2 → 372
    Rubrum_tdh; Rubrum transdehydrogenase NAD-binding and catalytic domains
    pfam12769
    Location:449 → 532
    PNTB_4TM; 4TM region of pyridine nucleotide transhydrogenase, mitoch
Nucleotide Protein
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