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Stpg1 sperm tail PG rich repeat containing 1 [ Mus musculus (house mouse) ]

Gene ID: 78806, updated on 11-Apr-2024

Summary

Official Symbol
Stpg1provided by MGI
Official Full Name
sperm tail PG rich repeat containing 1provided by MGI
Primary source
MGI:MGI:1926056
See related
Ensembl:ENSMUSG00000028801 AllianceGenome:MGI:1926056
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Mapo2; 4930403G18Rik; 4930555I21Rik
Summary
Predicted to be involved in positive regulation of apoptotic process and positive regulation of mitochondrial membrane permeability involved in apoptotic process. Predicted to act upstream of or within apoptotic process. Predicted to be located in cytoplasm and nucleus. Orthologous to human STPG1 (sperm tail PG-rich repeat containing 1). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Restricted expression toward testis adult (RPKM 36.0) See more
Orthologs
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Genomic context

See Stpg1 in Genome Data Viewer
Location:
4 D3; 4 67.7 cM
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (135221971..135265015)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (135494670..135537803)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene noncompact myelin associated protein Neighboring gene CapStarr-seq enhancer MGSCv37_chr4:134982608-134982761 Neighboring gene regulator of calcineurin 3 Neighboring gene microRNA 700 Neighboring gene STARR-positive B cell enhancer ABC_E9603 Neighboring gene STARR-positive B cell enhancer ABC_E1286 Neighboring gene NIPA-like domain containing 3 Neighboring gene STARR-positive B cell enhancer mm9_chr4:135050361-135050662 Neighboring gene STARR-seq mESC enhancer starr_11721 Neighboring gene STARR-seq mESC enhancer starr_11724 Neighboring gene grainyhead like transcription factor 3 Neighboring gene STARR-positive B cell enhancer ABC_E6235 Neighboring gene CapStarr-seq enhancer MGSCv37_chr4:135126769-135126952 Neighboring gene STARR-seq mESC enhancer starr_11727 Neighboring gene predicted gene, 30888 Neighboring gene STARR-seq mESC enhancer starr_11728 Neighboring gene STARR-seq mESC enhancer starr_11730 Neighboring gene RIKEN cDNA 1700029M20 gene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General protein information

Preferred Names
O(6)-methylguanine-induced apoptosis 2
Names
O6-methylguanine-induced apoptosis 2
UPF0490 protein C1orf201 homolog
sperm-tail PG-rich repeat-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001419281.1NP_001406210.1  O(6)-methylguanine-induced apoptosis 2 isoform a

    Status: VALIDATED

    Source sequence(s)
    AL670720
    UniProtKB/Swiss-Prot
    Q9D2F5
  2. NM_001419282.1NP_001406211.1  O(6)-methylguanine-induced apoptosis 2 isoform b

    Status: VALIDATED

    Source sequence(s)
    AL670720
  3. NM_001419286.1NP_001406215.1  O(6)-methylguanine-induced apoptosis 2 isoform c

    Status: VALIDATED

    Source sequence(s)
    AL670720
  4. NM_001419287.1NP_001406216.1  O(6)-methylguanine-induced apoptosis 2 isoform c

    Status: VALIDATED

    Source sequence(s)
    AL670720
  5. NM_030189.4NP_084465.1  O(6)-methylguanine-induced apoptosis 2 isoform a

    See identical proteins and their annotated locations for NP_084465.1

    Status: VALIDATED

    Source sequence(s)
    AL670720
    Consensus CDS
    CCDS18787.1
    UniProtKB/Swiss-Prot
    Q9D2F5
    UniProtKB/TrEMBL
    A6H5V9
    Related
    ENSMUSP00000067647.3, ENSMUST00000063707.3

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    135221971..135265015
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017320458.3XP_017175947.1  O(6)-methylguanine-induced apoptosis 2 isoform X5

  2. XM_017320457.3XP_017175946.1  O(6)-methylguanine-induced apoptosis 2 isoform X4

    UniProtKB/TrEMBL
    A6H5V9
  3. XM_006539286.5XP_006539349.1  O(6)-methylguanine-induced apoptosis 2 isoform X1

    See identical proteins and their annotated locations for XP_006539349.1

    UniProtKB/Swiss-Prot
    Q9D2F5
    UniProtKB/TrEMBL
    A6H5V9
  4. XM_006539285.4XP_006539348.1  O(6)-methylguanine-induced apoptosis 2 isoform X1

    See identical proteins and their annotated locations for XP_006539348.1

    UniProtKB/Swiss-Prot
    Q9D2F5
    UniProtKB/TrEMBL
    A6H5V9
  5. XM_006539287.4XP_006539350.1  O(6)-methylguanine-induced apoptosis 2 isoform X1

    See identical proteins and their annotated locations for XP_006539350.1

    UniProtKB/Swiss-Prot
    Q9D2F5
    UniProtKB/TrEMBL
    A6H5V9
  6. XM_011250356.3XP_011248658.1  O(6)-methylguanine-induced apoptosis 2 isoform X1

    See identical proteins and their annotated locations for XP_011248658.1

    UniProtKB/Swiss-Prot
    Q9D2F5
    UniProtKB/TrEMBL
    A6H5V9
  7. XM_006539288.2XP_006539351.1  O(6)-methylguanine-induced apoptosis 2 isoform X2

    UniProtKB/TrEMBL
    A6H5V9