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Kiss1r KISS1 receptor [ Rattus norvegicus (Norway rat) ]

Gene ID: 78976, updated on 2-May-2024

Summary

Official Symbol
Kiss1rprovided by RGD
Official Full Name
KISS1 receptorprovided by RGD
Primary source
RGD:70930
See related
Ensembl:ENSRNOG00000011954 AllianceGenome:RGD:70930
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Gpr54
Summary
Enables G protein-coupled peptide receptor activity and neuropeptide binding activity. Involved in several processes, including arachidonic acid secretion; positive regulation of cell communication; and positive regulation of stress fiber assembly. Located in membrane. Human ortholog(s) of this gene implicated in central precocious puberty 1; hypogonadism; and hypogonadotropic hypogonadism 8 with or without anosmia. Orthologous to human KISS1R (KISS1 receptor). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in Brain (RPKM 5.8), Testes (RPKM 0.9) and 1 other tissue See more
Orthologs
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Genomic context

Location:
7q11
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 7 NC_086025.1 (10435766..10439424, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 7 NC_051342.1 (9785135..9790283, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 7 NC_005106.4 (12606210..12609868, complement)

Chromosome 7 - NC_086025.1Genomic Context describing neighboring genes Neighboring gene WD repeat domain 18 Neighboring gene AT-rich interaction domain 3A Neighboring gene R3H domain containing 4 Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables G protein-coupled peptide receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables G protein-coupled peptide receptor activity IPI
Inferred from Physical Interaction
more info
PubMed 
enables G protein-coupled peptide receptor activity ISO
Inferred from Sequence Orthology
more info
 
enables neuropeptide binding IDA
Inferred from Direct Assay
more info
PubMed 
enables neuropeptide receptor activity IEA
Inferred from Electronic Annotation
more info
 
enables neuropeptide receptor activity ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 
located_in cell surface ISO
Inferred from Sequence Orthology
more info
 
located_in cilium IEA
Inferred from Electronic Annotation
more info
 
located_in cilium ISO
Inferred from Sequence Orthology
more info
 
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 
located_in intracellular membrane-bounded organelle ISO
Inferred from Sequence Orthology
more info
 
located_in membrane ISO
Inferred from Sequence Orthology
more info
 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
kiSS-1 receptor
Names
G protein-coupled receptor 54
G-protein coupled receptor OT7T175
kiSS-
kiSS-1R
kisspeptins receptor
metastin receptor
orphan G protein-coupled receptor GPR54
rOT7T175

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001301151.1NP_001288080.1  kiSS-1 receptor isoform 2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) uses an alternate, in-frame acceptor splice site at the 3' terminal exon compared to variant 1. The resulting shorter isoform (2) lacks two internal amino acids compared to isoform 1.
    Source sequence(s)
    JAXUCZ010000007
    UniProtKB/Swiss-Prot
    Q924U1, Q9Z0T7
    Conserved Domains (2) summary
    pfam00001
    Location:59321
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    cl21561
    Location:49191
    7tm_4; Olfactory receptor
  2. NM_023992.2NP_076482.2  kiSS-1 receptor isoform 1

    See identical proteins and their annotated locations for NP_076482.2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) encodes the longer isoform (1).
    Source sequence(s)
    JAXUCZ010000007
    UniProtKB/Swiss-Prot
    Q924U1, Q9Z0T7
    UniProtKB/TrEMBL
    A0A0G2JSL6, A0A1W2Q6L7, A6K8U8
    Related
    ENSRNOP00000016395.3, ENSRNOT00000016396.6
    Conserved Domains (1) summary
    cd15095
    Location:43334
    7tmA_KiSS1R; KiSS1-derived peptide (kisspeptin) receptor, member of the class A family of seven-transmembrane G protein-coupled receptors

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086025.1 Reference GRCr8

    Range
    10435766..10439424 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)