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PF3D7_1020400 rRNA (cytosine-C(5))-methyltransferase, putative [ Plasmodium falciparum 3D7 ]

Gene ID: 810355, updated on 17-May-2024

Summary

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Gene symbol
PF3D7_1020400
Gene description
rRNA (cytosine-C(5))-methyltransferase, putative
Primary source
PlasmoDB:PF3D7_1020400
Locus tag
PF3D7_1020400
Gene type
protein coding
RNA name
rRNA (cytosine-C(5))-methyltransferase, putative
RefSeq status
PROVISIONAL
Organism
Plasmodium falciparum 3D7 (isolate: 3D7)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
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Genomic context

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See PF3D7_1020400 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
2
Sequence:
Chromosome: 10; NC_037281.1 (822602..824593, complement)

Chromosome 10 - NC_037281.1Genomic Context describing neighboring genes Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene cytoplasmic dynein intermediate chain, putative Neighboring gene ribosomal silencing factor RsfS, putative Neighboring gene conserved Plasmodium membrane protein, unknown function

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037281.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, et al. Nature, 2002 Oct 3. PMID 12368864, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by GeneDB

Function Evidence Code Pubs
enables rRNA (cytosine-C5-)-methyltransferase activity ISS
Inferred from Sequence or Structural Similarity
more info
  
Component Evidence Code Pubs
located_in nucleolus ISS
Inferred from Sequence or Structural Similarity
more info
  

General protein information

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Preferred Names
rRNA (cytosine-C(5))-methyltransferase, putative
XP_001347482.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_037281.1 Reference assembly

    Range
    822602..824593 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001347446.1 → XP_001347482.1  rRNA (cytosine-C(5))-methyltransferase, putative [Plasmodium falciparum 3D7]

    See identical proteins and their annotated locations for XP_001347482.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A024V738, A0A0L1I9Z2, A0A0L7LZR6, A0A2I0BR22, Q8IJJ8, W7FCH6, W7JBT7
    Conserved Domains (1) summary
    COG0144
    Location:186 → 585
    RsmB; 16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family [Translation, ribosomal structure and biogenesis]
Nucleotide Protein
Heading Accession and Version

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