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PF3D7_1431600 succinyl-CoA ligase [ADP-forming] subunit beta, putative [ Plasmodium falciparum 3D7 ]

Gene ID: 811877, updated on 17-May-2024

Summary

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Gene symbol
PF3D7_1431600
Gene description
succinyl-CoA ligase [ADP-forming] subunit beta, putative
Primary source
PlasmoDB:PF3D7_1431600
Locus tag
PF3D7_1431600
Gene type
protein coding
RNA name
succinyl-CoA ligase [ADP-forming] subunit beta, putative
RefSeq status
PROVISIONAL
Organism
Plasmodium falciparum 3D7 (isolate: 3D7)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
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Genomic context

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See PF3D7_1431600 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
1
Sequence:
Chromosome: 14; NC_037283.1 (1244018..1245406)

Chromosome 14 - NC_037283.1Genomic Context describing neighboring genes Neighboring gene surface-related antigen SRA Neighboring gene mitogen-activated protein kinase 1 Neighboring gene 60S ribosomal protein L14, putative Neighboring gene apyrase, putative

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037283.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The nucleotide specificity of succinyl-CoA synthetase of Plasmodium falciparum is not determined by charged gatekeeper residues alone. Vashisht K, et al. FEBS Open Bio, 2021 Mar. PMID 33174373, Free PMC Article
  2. A Prioritized and Validated Resource of Mitochondrial Proteins in Plasmodium Identifies Unique Biology. van Esveld SL, et al. mSphere, 2021 Oct 27. PMID 34494883, Free PMC Article
  3. Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, et al. Nature, 2002 Oct 3. PMID 12368864, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by GeneDB

Function Evidence Code Pubs
enables succinate-CoA ligase (ADP-forming) activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within succinyl-CoA metabolic process IDA
Inferred from Direct Assay
more info
 PubMed 
acts_upstream_of_or_within tricarboxylic acid cycle ISS
Inferred from Sequence or Structural Similarity
more info
  
Component Evidence Code Pubs
located_in mitochondrion ISS
Inferred from Sequence or Structural Similarity
more info
  
located_in mitochondrion RCA
inferred from Reviewed Computational Analysis
more info
 PubMed 

General protein information

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Preferred Names
succinyl-CoA ligase [ADP-forming] subunit beta, putative
XP_001348469.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_037283.1 Reference assembly

    Range
    1244018..1245406
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001348433.1 → XP_001348469.1  succinyl-CoA ligase [ADP-forming] subunit beta, putative [Plasmodium falciparum 3D7]

    See identical proteins and their annotated locations for XP_001348469.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A024V0U0, A0A024WI14, A0A024WZF3, A0A0L1I557, A0A0L7K6R8, Q8ILE9, W4I8D7, W4IVC9, W7EUL9, W7FX57, W7JGV3, W7K7E4
    Conserved Domains (1) summary
    PLN00124
    Location:48 → 448
    PLN00124; succinyl-CoA ligase [GDP-forming] subunit beta; Provisional
Nucleotide Protein
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