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PF3D7_1446400 pyruvate dehydrogenase E1 component subunit beta [ Plasmodium falciparum 3D7 ]

Gene ID: 812023, updated on 16-Oct-2023

Summary

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Gene symbol
PF3D7_1446400
Gene description
pyruvate dehydrogenase E1 component subunit beta
Locus tag
PF3D7_1446400
Gene type
protein coding
RNA name
pyruvate dehydrogenase E1 component subunit beta
RefSeq status
PROVISIONAL
Organism
Plasmodium falciparum 3D7 (isolate: 3D7)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
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Genomic context

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Location:
chromosome: 14
Exon count:
1
Sequence:
Chromosome: 14; NC_037283.1 (1902916..1904163, complement)

Chromosome 14 - NC_037283.1Genomic Context describing neighboring genes Neighboring gene M17 leucyl aminopeptidase Neighboring gene conserved Plasmodium membrane protein, unknown function Neighboring gene nucleoporin NUP313, putative Neighboring gene centrin-2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037283.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The malaria parasite Plasmodium falciparum has only one pyruvate dehydrogenase complex, which is located in the apicoplast. Foth BJ, et al. Mol Microbiol, 2005 Jan. PMID 15612915
  2. Integrative proteomics and bioinformatic prediction enable a high-confidence apicoplast proteome in malaria parasites. Boucher MJ, et al. PLoS Biol, 2018 Sep. PMID 30212465, Free PMC Article
  3. Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, et al. Nature, 2002 Oct 3. PMID 12368864, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by GeneDB

Component Evidence Code Pubs
located_in apicoplast HDA PubMed 
located_in apicoplast IDA
Inferred from Direct Assay
more info
 PubMed 
part_of pyruvate dehydrogenase complex IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
pyruvate dehydrogenase E1 component subunit beta
XP_001348615.2

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_037283.1 Reference assembly

    Range
    1902916..1904163 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001348579.2 → XP_001348615.2  pyruvate dehydrogenase E1 component subunit beta [Plasmodium falciparum 3D7]

    See identical proteins and their annotated locations for XP_001348615.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A024V0G0, A0A024VZV8, A0A024WI19, A0A024X049, A0A0L1IDP7, Q5VGY3, Q8IL09, W4I7X7, W4IVR2, W7EU82, W7FHG6, W7JXV5
    Conserved Domains (1) summary
    PTZ00182
    Location:58 → 411
    PTZ00182; 3-methyl-2-oxobutanate dehydrogenase; Provisional
Nucleotide Protein
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