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PF3D7_0204500 aspartate transaminase [ Plasmodium falciparum 3D7 ]

Gene ID: 812638, updated on 16-Oct-2023

Summary

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Gene symbol
PF3D7_0204500
Gene description
aspartate transaminase
Locus tag
PF3D7_0204500
Gene type
protein coding
RNA name
aspartate transaminase
RefSeq status
PROVISIONAL
Organism
Plasmodium falciparum 3D7 (isolate: 3D7)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
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Genomic context

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Location:
chromosome: 2
Exon count:
1
Sequence:
Chromosome: 2; NC_037280.1 (198353..199570, complement)

Chromosome 2 - NC_037280.1Genomic Context describing neighboring genes Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene dynein light chain, putative Neighboring gene 5'-3' exonuclease, putative Neighboring gene hexose transporter

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037280.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Elucidating the mitochondrial proteome of Toxoplasma gondii reveals the presence of a divergent cytochrome c oxidase. Seidi A, et al. Elife, 2018 Sep 11. PMID 30204084, Free PMC Article
  2. Chromosome 2 sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, et al. Science, 1998 Nov 6. PMID 9804551
  3. A Prioritized and Validated Resource of Mitochondrial Proteins in Plasmodium Identifies Unique Biology. van Esveld SL, et al. mSphere, 2021 Oct 27. PMID 34494883, Free PMC Article
  4. Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, et al. Nature, 2002 Oct 3. PMID 12368864, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by GeneDB

Function Evidence Code Pubs
enables transaminase activity ISM
Inferred from Sequence Model
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within amino acid metabolic process ISM
Inferred from Sequence Model
more info
  
Component Evidence Code Pubs
located_in mitochondrion ISO
Inferred from Sequence Orthology
more info
 PubMed 
located_in mitochondrion RCA
inferred from Reviewed Computational Analysis
more info
 PubMed 

General protein information

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Preferred Names
aspartate transaminase
XP_001349556.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_037280.1 Reference assembly

    Range
    198353..199570 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001349520.1 → XP_001349556.1  aspartate transaminase [Plasmodium falciparum 3D7]

    See identical proteins and their annotated locations for XP_001349556.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A024VDF2, A0A024VX89, A0A024WF81, A0A024WXQ7, A0A024XFU2, A0A0L1IAP6, A0A0L7KFI7, O96142, W4IQI5, W4J7Z2, W7FJ85, W7FQL4, W7JJJ7, W7K0Z0
    Conserved Domains (1) summary
    PTZ00376
    Location:1 → 405
    PTZ00376; aspartate aminotransferase; Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
3K7Y_A.1

Gene LinkOut

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