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PF3D7_0923600 lipoate-protein ligase 2 [ Plasmodium falciparum 3D7 ]

Gene ID: 813512, updated on 17-May-2024

Summary

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Gene symbol
PF3D7_0923600
Gene description
lipoate-protein ligase 2
Primary source
PlasmoDB:PF3D7_0923600
Locus tag
PF3D7_0923600
Gene type
protein coding
RNA name
lipoate-protein ligase 2
RefSeq status
PROVISIONAL
Organism
Plasmodium falciparum 3D7 (isolate: 3D7)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
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Genomic context

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Location:
chromosome: 9
Exon count:
1
Sequence:
Chromosome: 9; NC_004330.2 (958763..959917)

Chromosome 9 - NC_004330.2Genomic Context describing neighboring genes Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene cyclin-dependent kinases regulatory subunit, putative Neighboring gene conserved protein, unknown function Neighboring gene thioredoxin reductase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_004330.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Apicoplast lipoic acid protein ligase B is not essential for Plasmodium falciparum. Günther S, et al. PLoS Pathog, 2007 Dec. PMID 18069893, Free PMC Article
  2. A novel lipoate attachment enzyme is shared by Plasmodium and Chlamydia species. Afanador GA, et al. Mol Microbiol, 2017 Nov. PMID 28836704, Free PMC Article
  3. Scavenging of the cofactor lipoate is essential for the survival of the malaria parasite Plasmodium falciparum. Allary M, et al. Mol Microbiol, 2007 Mar. PMID 17244193, Free PMC Article
  4. Integrative proteomics and bioinformatic prediction enable a high-confidence apicoplast proteome in malaria parasites. Boucher MJ, et al. PLoS Biol, 2018 Sep. PMID 30212465, Free PMC Article
  5. Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. Hall N, et al. Nature, 2002 Oct 3. PMID 12368867

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by GeneDB

Function Evidence Code Pubs
enables lipoate-protein ligase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables lipoyltransferase activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within protein lipoylation IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
located_in apicoplast HDA PubMed 
located_in apicoplast IDA
Inferred from Direct Assay
more info
 PubMed 
located_in mitochondrion IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
lipoate-protein ligase 2
XP_001352107.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004330.2 Reference assembly

    Range
    958763..959917
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001352071.1 → XP_001352107.1  lipoate-protein ligase 2 [Plasmodium falciparum 3D7]

    See identical proteins and their annotated locations for XP_001352107.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q19X43, Q8I2S0
    UniProtKB/TrEMBL
    A0A024V842, A0A024VH24, A0A024W897, A0A024WQE7, A0A024X7Q2, A0A0L0CX24, A0A0L1IHB2, A0A0L7K964, A0A0L7M7S4, W4IHL9, W4IYX5, W7FG34, W7FJI4, W7JMR6, W7JPA3
    Conserved Domains (1) summary
    cl14057
    Location:33 → 299
    BPL_LplA_LipB; biotin-lipoate ligase family
Nucleotide Protein
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