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PF3D7_0927300 fumarate hydratase [ Plasmodium falciparum 3D7 ]

Gene ID: 813548, updated on 16-Oct-2023

Summary

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Gene symbol
PF3D7_0927300
Gene description
fumarate hydratase
Locus tag
PF3D7_0927300
Gene type
protein coding
RNA name
fumarate hydratase
RefSeq status
PROVISIONAL
Organism
Plasmodium falciparum 3D7 (isolate: 3D7)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
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Genomic context

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Location:
chromosome: 9
Exon count:
1
Sequence:
Chromosome: 9; NC_004330.2 (1113958..1116003)

Chromosome 9 - NC_004330.2Genomic Context describing neighboring genes Neighboring gene conserved protein, unknown function Neighboring gene zinc finger protein, putative Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene dynein light chain, putative

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_004330.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Biochemical characterization and essentiality of Plasmodium fumarate hydratase. Jayaraman V, et al. J Biol Chem, 2018 Apr 20. PMID 29449371, Free PMC Article
  2. A Prioritized and Validated Resource of Mitochondrial Proteins in Plasmodium Identifies Unique Biology. van Esveld SL, et al. mSphere, 2021 Oct 27. PMID 34494883, Free PMC Article
  3. A protein interaction network of the malaria parasite Plasmodium falciparum. LaCount DJ, et al. Nature, 2005 Nov 3. PMID 16267556
  4. Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. Hall N, et al. Nature, 2002 Oct 3. PMID 12368867

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by GeneDB

Function Evidence Code Pubs
enables fumarate hydratase activity IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within fumarate metabolic process IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IMP
Inferred from Mutant Phenotype
more info
 PubMed 
located_in mitochondrion RCA
inferred from Reviewed Computational Analysis
more info
 PubMed 

General protein information

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Preferred Names
fumarate hydratase
XP_001352143.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004330.2 Reference assembly

    Range
    1113958..1116003
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001352107.1 → XP_001352143.1  fumarate hydratase [Plasmodium falciparum 3D7]

    See identical proteins and their annotated locations for XP_001352143.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A024V8B8, A0A024VSM2, A0A024VYB4, A0A024WRT2, A0A024WYG6, A0A0L0CU55, A0A0L1IF21, A0A0L7KJP0, A0A0L7M1A7, Q8I2N6, W4IGK8, W4IZ19, W7F2L6, W7FWB9, W7JNY8, W7K5B7
    Conserved Domains (1) summary
    PTZ00226
    Location:15 → 680
    PTZ00226; fumarate hydratase; Provisional
Nucleotide Protein
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